RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C RSA4P25382 515 aaKnown RBP0.09□□□□□ -2.4
SPG3YDR504C RRN10P38204 145 aa0.09□□□□□ -2.4
SPG3YDR504C GEP4P38812 185 aa0.09□□□□□ -2.4
SPG3YDR504C POP2P39008 433 aa0.09□□□□□ -2.4
SPG3YDR504C RQC1Q05468 723 aaKnown RBP0.09□□□□□ -2.4
SPG3YDR504C HSP42Q12329 375 aa0.09□□□□□ -2.4
SPG3YDR504C PRP46Q12417 451 aaPredicted RBP0.09□□□□□ -2.4
SPG3YDR504C GPI10P30777 616 aa0.08□□□□□ -2.4
SPG3YDR504C BUD13P46947 266 aaPredicted RBP0.08□□□□□ -2.4
SPG3YDR504C FMS1P50264 508 aa0.08□□□□□ -2.4
SPG3YDR504C ROG1P53118 685 aa0.08□□□□□ -2.4
SPG3YDR504C PRM1P53835 661 aa0.08□□□□□ -2.4
SPG3YDR504C GMC1Q04399 608 aa0.08□□□□□ -2.4
SPG3YDR504C TFC7Q12415 435 aa0.08□□□□□ -2.4
SPG3YDR504C ATP1P07251 545 aaKnown RBP0.07□□□□□ -2.4
SPG3YDR504C ALG1P16661 449 aa0.07□□□□□ -2.4
SPG3YDR504C GPX2P38143 162 aa0.07□□□□□ -2.4
SPG3YDR504C GPI16P38875 610 aa0.07□□□□□ -2.4
SPG3YDR504C YER084WP40057 128 aa0.07□□□□□ -2.4
SPG3YDR504C YCH1P42937 148 aa0.07□□□□□ -2.4
SPG3YDR504C YFR054CP43622 192 aa0.07□□□□□ -2.4
SPG3YDR504C YJR054WP47114 497 aa0.07□□□□□ -2.4
SPG3YDR504C CDH1P53197 566 aa0.07□□□□□ -2.4
SPG3YDR504C SPR6Q01684 191 aa0.07□□□□□ -2.4
SPG3YDR504C MMT1Q03218 510 aa0.07□□□□□ -2.4
SPG3YDR504C ATG16Q03818 150 aa0.07□□□□□ -2.4
SPG3YDR504C YDR222WQ04925 415 aa0.07□□□□□ -2.4
SPG3YDR504C FSH2Q05015 223 aa0.07□□□□□ -2.4
SPG3YDR504C YPR063CQ12160 140 aa0.07□□□□□ -2.4
SPG3YDR504C ATP16Q12165 160 aa0.07□□□□□ -2.4
SPG3YDR504C BUG1Q12191 341 aa0.07□□□□□ -2.4
SPG3YDR504C PAB1P04147 577 aaKnown RBP RIP-Chip data0.06□□□□□ -2.4not detected
SPG3YDR504C AAC3P18238 307 aa0.06□□□□□ -2.4
SPG3YDR504C LDS1P31379 325 aa0.06□□□□□ -2.4
SPG3YDR504C CIN2P46670 268 aa0.06□□□□□ -2.4
SPG3YDR504C OCA4P25366 362 aa0.05□□□□□ -2.4
SPG3YDR504C NRG2P38082 220 aa0.05□□□□□ -2.4
SPG3YDR504C MET18P40469 1032 aa0.05□□□□□ -2.4
SPG3YDR504C NAS6P50086 228 aa0.05□□□□□ -2.4
SPG3YDR504C CGI121Q03705 181 aaKnown RBP0.05□□□□□ -2.4
SPG3YDR504C YDR131CQ03899 556 aa0.05□□□□□ -2.4
SPG3YDR504C YDR114CQ04597 100 aa0.05□□□□□ -2.4
SPG3YDR504C OPY2Q06810 360 aa0.05□□□□□ -2.4
SPG3YDR504C CLB1P24868 471 aa0.04□□□□□ -2.4
SPG3YDR504C GGC1P38988 300 aa0.04□□□□□ -2.4
SPG3YDR504C ASG7P46993 209 aa0.04□□□□□ -2.4
SPG3YDR504C YGR117CP53270 476 aa0.04□□□□□ -2.4
SPG3YDR504C TRM112P53738 135 aaPredicted RBP0.04□□□□□ -2.4
SPG3YDR504C COG4Q06096 861 aa0.04□□□□□ -2.4
SPG3YDR504C GCN4P03069 281 aa0.03□□□□□ -2.4
SPG3YDR504C NIP1P32497 812 aaKnown RBP0.03□□□□□ -2.4
SPG3YDR504C COS9P36034 407 aa0.03□□□□□ -2.4
SPG3YDR504C DXO1Q06349 442 aa0.03□□□□□ -2.4
SPG3YDR504C CTA1P15202 515 aa0.02□□□□□ -2.41
SPG3YDR504C URA4P20051 364 aa0.02□□□□□ -2.41
SPG3YDR504C MCM10P32354 571 aa0.02□□□□□ -2.41
SPG3YDR504C NOP16P40007 231 aaKnown RBP0.02□□□□□ -2.41
SPG3YDR504C YER188WP40103 239 aa0.02□□□□□ -2.41
SPG3YDR504C SPO22P40511 975 aa0.02□□□□□ -2.41
SPG3YDR504C MNP1P53163 194 aaPredicted RBP0.02□□□□□ -2.41
SPG3YDR504C JJJ1P53863 590 aa0.02□□□□□ -2.41
SPG3YDR504C ARR1Q06596 294 aa0.02□□□□□ -2.41
SPG3YDR504C TIR2P33890 251 aa0.01□□□□□ -2.41
SPG3YDR504C TIP20P33891 701 aa0.01□□□□□ -2.41
SPG3YDR504C MIG2P53035 382 aa0.01□□□□□ -2.41
SPG3YDR504C YNL095CP53932 642 aa0.01□□□□□ -2.41
SPG3YDR504C VTA1Q06263 330 aa0.01□□□□□ -2.41
SPG3YDR504C FEX1Q08913 375 aa0.01□□□□□ -2.41
SPG3YDR504C FEX2Q08991 375 aa0.01□□□□□ -2.41
SPG3YDR504C RTN2Q12443 393 aa0.01□□□□□ -2.41
SPG3YDR504C ENT1Q12518 454 aa0.01□□□□□ -2.41
SPG3YDR504C ADE4P04046 510 aaKnown RBP0□□□□□ -2.41
SPG3YDR504C BRF1P29056 596 aa0□□□□□ -2.41
SPG3YDR504C MCR1P36060 302 aaKnown RBP0□□□□□ -2.41
SPG3YDR504C COS5P47187 383 aa0□□□□□ -2.41
SPG3YDR504C CSI1Q04368 295 aa0□□□□□ -2.41
SPG3YDR504C RRP45Q05636 305 aaKnown RBP0□□□□□ -2.41
SPG3YDR504C COS7Q07788 383 aa0□□□□□ -2.41
SPG3YDR504C DIS3Q08162 1001 aaKnown RBP0□□□□□ -2.41
SPG3YDR504C PHO80P20052 293 aa-0.01□□□□□ -2.41
SPG3YDR504C ROX1P25042 368 aa-0.01□□□□□ -2.41
SPG3YDR504C RPB9P27999 122 aa-0.01□□□□□ -2.41
SPG3YDR504C DAN1P47178 298 aa-0.01□□□□□ -2.41
SPG3YDR504C NUP57P48837 541 aa-0.01□□□□□ -2.41
SPG3YDR504C SGT2Q12118 346 aaKnown RBP-0.01□□□□□ -2.41
SPG3YDR504C YHR086W-AQ3E746 53 aa-0.01□□□□□ -2.41
SPG3YDR504C COX3P00420 269 aa-0.02□□□□□ -2.41
SPG3YDR504C CLB6P32943 380 aa-0.02□□□□□ -2.41
SPG3YDR504C ABM1P47146 123 aa-0.02□□□□□ -2.41
SPG3YDR504C TOS2P50078 622 aa-0.02□□□□□ -2.41
SPG3YDR504C RPA49Q01080 415 aaPredicted RBP-0.02□□□□□ -2.41
SPG3YDR504C UBX2Q04228 584 aa-0.02□□□□□ -2.41
SPG3YDR504C FAR1P21268 830 aa-0.03□□□□□ -2.41
SPG3YDR504C SSE1P32589 693 aaKnown RBP-0.03□□□□□ -2.41
SPG3YDR504C MED8P38304 223 aa-0.03□□□□□ -2.41
SPG3YDR504C MMF1P40185 145 aaKnown RBP-0.03□□□□□ -2.41
SPG3YDR504C SLT2Q00772 484 aa-0.03□□□□□ -2.41
SPG3YDR504C YMR010WQ03687 405 aa-0.03□□□□□ -2.41
SPG3YDR504C UTP15Q04305 513 aaKnown RBP-0.03□□□□□ -2.41
SPG3YDR504C ECM19Q06011 112 aa-0.03□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms