RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W YMR317WQ04893 1140 aa3.99□□□□□ -1.77
SPT3YDR392W YLL007CQ07799 665 aa3.99□□□□□ -1.77
SPT3YDR392W YAR066WP0CX18 203 aa3.98□□□□□ -1.77
SPT3YDR392W YHR214WP0CX19 203 aa3.98□□□□□ -1.77
SPT3YDR392W ECM8P38246 354 aa3.98□□□□□ -1.77
SPT3YDR392W YSW1P38280 609 aa3.98□□□□□ -1.77
SPT3YDR392W RRT2P38332 387 aa3.98□□□□□ -1.77
SPT3YDR392W ALG5P40350 334 aa3.98□□□□□ -1.77
SPT3YDR392W DPH1P40487 425 aaKnown RBP3.98□□□□□ -1.77
SPT3YDR392W PAC11P40960 533 aa3.98□□□□□ -1.77
SPT3YDR392W YGR237CP50089 785 aa3.98□□□□□ -1.77
SPT3YDR392W TAF4P50105 388 aa3.98□□□□□ -1.77
SPT3YDR392W COG6P53959 839 aa3.98□□□□□ -1.77
SPT3YDR392W SED1Q01589 338 aa3.98□□□□□ -1.77
SPT3YDR392W MSC1Q03104 513 aa3.98□□□□□ -1.77
SPT3YDR392W DCR2Q05924 578 aa3.98□□□□□ -1.77
SPT3YDR392W STP4Q07351 490 aa3.98□□□□□ -1.77
SPT3YDR392W NTG2Q08214 380 aa3.98□□□□□ -1.77
SPT3YDR392W SKS1Q12505 502 aa3.98□□□□□ -1.77
SPT3YDR392W PHO81P17442 1178 aa3.97□□□□□ -1.77
SPT3YDR392W HXT3P32466 567 aaKnown RBP3.97□□□□□ -1.77
SPT3YDR392W MNS1P32906 549 aa3.97□□□□□ -1.77
SPT3YDR392W GGC1P38988 300 aa3.97□□□□□ -1.77
SPT3YDR392W YFL015CP43578 164 aa3.97□□□□□ -1.77
SPT3YDR392W ADO1P47143 340 aaKnown RBP3.97□□□□□ -1.77
SPT3YDR392W CRZ1P53968 678 aa3.97□□□□□ -1.77
SPT3YDR392W RLI1Q03195 608 aaKnown RBP3.97□□□□□ -1.77
SPT3YDR392W SOV1Q04748 898 aa3.97□□□□□ -1.77
SPT3YDR392W UTP21Q06078 939 aaPredicted RBP3.97□□□□□ -1.77
SPT3YDR392W RIF2Q06208 395 aa3.97□□□□□ -1.77
SPT3YDR392W YEH1Q07804 573 aa3.97□□□□□ -1.77
SPT3YDR392W RRG7Q08774 242 aaPredicted RBP3.97□□□□□ -1.77
SPT3YDR392W CRC1Q12289 327 aa3.97□□□□□ -1.77
SPT3YDR392W RPS17AP02407 136 aaKnown RBP3.96□□□□□ -1.78
SPT3YDR392W STE3P06783 470 aa3.96□□□□□ -1.78
SPT3YDR392W RPS17BP14127 136 aaKnown RBP3.96□□□□□ -1.78
SPT3YDR392W TFS1P14306 219 aa3.96□□□□□ -1.78
SPT3YDR392W ASC1P38011 319 aaKnown RBP3.96□□□□□ -1.78
SPT3YDR392W RBG1P39729 369 aa3.96□□□□□ -1.78
SPT3YDR392W RET2P43621 546 aa3.96□□□□□ -1.78
SPT3YDR392W ALB1P47019 175 aaPredicted RBP3.96□□□□□ -1.78
SPT3YDR392W ATP22P50273 684 aaPredicted RBP3.96□□□□□ -1.78
SPT3YDR392W ESBP6P53918 673 aa3.96□□□□□ -1.78
SPT3YDR392W YPL107WQ02873 248 aa3.96□□□□□ -1.78
SPT3YDR392W FRE8Q12209 686 aa3.96□□□□□ -1.78
SPT3YDR392W YPR064WQ12492 139 aa3.96□□□□□ -1.78
SPT3YDR392W PDX1P16451 410 aa3.95□□□□□ -1.78
SPT3YDR392W GPI12P23797 304 aa3.95□□□□□ -1.78
SPT3YDR392W PEX5P35056 612 aa3.95□□□□□ -1.78
SPT3YDR392W CLG1P35190 452 aa3.95□□□□□ -1.78
SPT3YDR392W CDS1P38221 457 aa3.95□□□□□ -1.78
SPT3YDR392W YEL068CP39977 110 aa3.95□□□□□ -1.78
SPT3YDR392W APS3P47064 194 aa3.95□□□□□ -1.78
SPT3YDR392W NOP15P53927 220 aaPredicted RBP3.95□□□□□ -1.78
SPT3YDR392W LSM3P57743 89 aaKnown RBP3.95□□□□□ -1.78
SPT3YDR392W FMN1Q03778 218 aa3.95□□□□□ -1.78
SPT3YDR392W RRP40Q08285 240 aaKnown RBP3.95□□□□□ -1.78
SPT3YDR392W SSC1P0CS90 654 aaKnown RBP3.94□□□□□ -1.78
SPT3YDR392W RPL20AP0CX23 172 aaKnown RBP3.94□□□□□ -1.78
SPT3YDR392W RPL20BP0CX24 172 aaPredicted RBP3.94□□□□□ -1.78
SPT3YDR392W CBS1P14066 229 aa3.94□□□□□ -1.78
SPT3YDR392W TRX1P22217 103 aaKnown RBP3.94□□□□□ -1.78
SPT3YDR392W CCT4P39078 528 aaKnown RBP3.94□□□□□ -1.78
SPT3YDR392W YIR014WP40570 242 aa3.94□□□□□ -1.78
SPT3YDR392W TDA10P42938 290 aa3.94□□□□□ -1.78
SPT3YDR392W YJR149WP47177 404 aa3.94□□□□□ -1.78
SPT3YDR392W PCP1P53259 346 aa3.94□□□□□ -1.78
SPT3YDR392W RSN1Q03516 953 aa3.94□□□□□ -1.78
SPT3YDR392W SNA4Q07549 140 aa3.94□□□□□ -1.78
SPT3YDR392W AIM41Q12032 185 aa3.94□□□□□ -1.78
SPT3YDR392W VCX1Q99385 411 aa3.94□□□□□ -1.78
SPT3YDR392W RAD52P06778 471 aaKnown RBP3.93□□□□□ -1.78
SPT3YDR392W GUK1P15454 187 aaKnown RBP3.93□□□□□ -1.78
SPT3YDR392W VPS33P20795 691 aa3.93□□□□□ -1.78
SPT3YDR392W SAN1P22470 610 aa3.93□□□□□ -1.78
SPT3YDR392W CBF5P33322 483 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SPT3YDR392W YCR041WP37265 110 aa3.93□□□□□ -1.78
SPT3YDR392W MTC6P38849 526 aa3.93□□□□□ -1.78
SPT3YDR392W APQ12P40532 138 aa3.93□□□□□ -1.78
SPT3YDR392W POP1P41812 875 aa3.93□□□□□ -1.78
SPT3YDR392W CIR1P42940 261 aa3.93□□□□□ -1.78
SPT3YDR392W YGR015CP53208 328 aa3.93□□□□□ -1.78
SPT3YDR392W PEF1P53238 335 aa3.93□□□□□ -1.78
SPT3YDR392W MMT1Q03218 510 aa3.93□□□□□ -1.78
SPT3YDR392W YDL180WQ12301 547 aa3.93□□□□□ -1.78
SPT3YDR392W DEP1P31385 405 aa3.92□□□□□ -1.78
SPT3YDR392W PHA2P32452 334 aa3.92□□□□□ -1.78
SPT3YDR392W YPT10P38146 199 aa3.92□□□□□ -1.78
SPT3YDR392W AST2P39945 430 aaKnown RBP3.92□□□□□ -1.78
SPT3YDR392W IMA5P40884 581 aa3.92□□□□□ -1.78
SPT3YDR392W OGG1P53397 376 aaPredicted RBP3.92□□□□□ -1.78
SPT3YDR392W TFB2Q02939 513 aa3.92□□□□□ -1.78
SPT3YDR392W USA1Q03714 838 aa3.92□□□□□ -1.78
SPT3YDR392W SCW10Q04951 389 aa3.92□□□□□ -1.78
SPT3YDR392W YPR147CQ06522 304 aaKnown RBP3.92□□□□□ -1.78
SPT3YDR392W NDL1Q06568 189 aa3.92□□□□□ -1.78
SPT3YDR392W ARR3Q06598 404 aa3.92□□□□□ -1.78
SPT3YDR392W SUI3P09064 285 aaKnown RBP3.91□□□□□ -1.78
SPT3YDR392W RAD51P25454 400 aa3.91□□□□□ -1.78
SPT3YDR392W RAD5P32849 1169 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms