RNA–Protein interactions for RNA: YDR185C

UPS3, Transcript of Mitochondrial protein of unknown function, yeast

Gene UPS3, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPS3	YDR185C	RPS16B	P0CX52	143 aa	Known RBP	4.96	□□□□□ -1.62
UPS3	YDR185C	MAS2	P11914	482 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	CDC42	P19073	191 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	YCR100C	P25606	316 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	HXT1	P32465	570 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	MNS1	P32906	549 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	SCO2	P38072	301 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	RRP3	P38712	501 aa	Known RBP	4.96	□□□□□ -1.62
UPS3	YDR185C	VPS52	P39904	641 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	UTP25	P40498	721 aa	Known RBP	4.96	□□□□□ -1.62
UPS3	YDR185C	TOS2	P50078	622 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	RSC9	Q03124	581 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	YMR102C	Q03177	834 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	SHS1	Q07657	551 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	YDL009C	Q12210	107 aa		4.96	□□□□□ -1.62
UPS3	YDR185C	ATP1	P07251	545 aa	Known RBP	4.95	□□□□□ -1.62
UPS3	YDR185C	SKT5	P34226	696 aa		4.95	□□□□□ -1.62
UPS3	YDR185C	FET3	P38993	636 aa		4.95	□□□□□ -1.62
UPS3	YDR185C	YGR168C	P53293	376 aa		4.95	□□□□□ -1.62
UPS3	YDR185C	YNR048W	P53740	393 aa		4.95	□□□□□ -1.62
UPS3	YDR185C	TDA7	P53882	636 aa	Predicted RBP	4.95	□□□□□ -1.62
UPS3	YDR185C	BOP2	Q06150	570 aa		4.95	□□□□□ -1.62
UPS3	YDR185C	VPS74	Q06385	345 aa		4.95	□□□□□ -1.62
UPS3	YDR185C	OSW1	Q08692	278 aa		4.95	□□□□□ -1.62
UPS3	YDR185C	AFT2	Q08957	416 aa		4.95	□□□□□ -1.62
UPS3	YDR185C	NUM1	Q00402	2748 aa		4.95	□□□□□ -1.62
UPS3	YDR185C	HEM2	P05373	342 aa		4.94	□□□□□ -1.62
UPS3	YDR185C	AMD1	P15274	810 aa	Known RBP	4.94	□□□□□ -1.62
UPS3	YDR185C	PET123	P17558	318 aa		4.94	□□□□□ -1.62
UPS3	YDR185C	DEG1	P31115	442 aa	Known RBP	4.94	□□□□□ -1.62
UPS3	YDR185C	PEX2	P32800	271 aa		4.94	□□□□□ -1.62
UPS3	YDR185C	CUE2	P36075	443 aa	Known RBP	4.94	□□□□□ -1.62
UPS3	YDR185C	BTT1	P40314	149 aa	Predicted RBP	4.94	□□□□□ -1.62
UPS3	YDR185C	YNL134C	P53912	376 aa	Known RBP	4.94	□□□□□ -1.62
UPS3	YDR185C	ODC1	Q03028	310 aa		4.94	□□□□□ -1.62
UPS3	YDR185C	BCP1	Q06338	283 aa		4.94	□□□□□ -1.62
UPS3	YDR185C	TOM1	Q03280	3268 aa		4.94	□□□□□ -1.62
UPS3	YDR185C	TEF1	P02994	458 aa	Known RBP	4.93	□□□□□ -1.62
UPS3	YDR185C	GDH1	P07262	454 aa	Known RBP	4.93	□□□□□ -1.62
UPS3	YDR185C	MRPL8	P22353	238 aa		4.93	□□□□□ -1.62
UPS3	YDR185C	GPI12	P23797	304 aa		4.93	□□□□□ -1.62
UPS3	YDR185C	MXR2	P25566	168 aa		4.93	□□□□□ -1.62
UPS3	YDR185C	RPL5	P26321	297 aa	Known RBP	4.93	□□□□□ -1.62
UPS3	YDR185C	VAM7	P32912	316 aa		4.93	□□□□□ -1.62
UPS3	YDR185C	MYO3	P36006	1272 aa		4.93	□□□□□ -1.62
UPS3	YDR185C	TCD1	P38756	429 aa		4.93	□□□□□ -1.62
UPS3	YDR185C	CFD1	P40558	293 aa		4.93	□□□□□ -1.62
UPS3	YDR185C	GCN20	P43535	752 aa	Known RBP	4.93	□□□□□ -1.62
UPS3	YDR185C	GWT1	P47026	490 aa		4.93	□□□□□ -1.62
UPS3	YDR185C	RLI1	Q03195	608 aa	Known RBP	4.93	□□□□□ -1.62
UPS3	YDR185C	YMR034C	Q05131	434 aa	Predicted RBP	4.93	□□□□□ -1.62
UPS3	YDR185C	YSP2	Q06681	1438 aa		4.93	□□□□□ -1.62
UPS3	YDR185C	NCA2	Q12374	616 aa		4.93	□□□□□ -1.62
UPS3	YDR185C	YAP1	P19880	650 aa	Known RBP	4.92	□□□□□ -1.62
UPS3	YDR185C	RPB4	P20433	221 aa	Predicted RBP	4.92	□□□□□ -1.62
UPS3	YDR185C	MBR1	P23493	339 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	CSM1	P25651	190 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	TIP1	P27654	210 aa	Predicted RBP	4.92	□□□□□ -1.62
UPS3	YDR185C	ERG1	P32476	496 aa	Known RBP	4.92	□□□□□ -1.62
UPS3	YDR185C	MRPS5	P33759	307 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	YKT6	P36015	200 aa	Known RBP	4.92	□□□□□ -1.62
UPS3	YDR185C	IML3	P38265	245 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	SHO1	P40073	367 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	DSE1	P40077	573 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	SIM1	P40472	476 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	YIL024C	P40543	189 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	SSN8	P47821	323 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	YGR117C	P53270	476 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	ERG13	P54839	491 aa	Known RBP	4.92	□□□□□ -1.62
UPS3	YDR185C	INP2	Q03824	705 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	RVB1	Q03940	463 aa	Known RBP	4.92	□□□□□ -1.62
UPS3	YDR185C	YDR415C	Q04033	374 aa	Predicted RBP	4.92	□□□□□ -1.62
UPS3	YDR185C	NAT4	Q04751	285 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	GPN3	Q06543	272 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	TIM18	Q08749	192 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	MUM3	Q08750	479 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	CRC1	Q12289	327 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	YOP1	Q12402	180 aa		4.92	□□□□□ -1.62
UPS3	YDR185C	RAD7	P06779	565 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	SPS22	P25380	463 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	DPH5	P32469	300 aa	Predicted RBP	4.91	□□□□□ -1.62
UPS3	YDR185C	ZUO1	P32527	433 aa	Known RBP	4.91	□□□□□ -1.62
UPS3	YDR185C	TOA2	P32774	122 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	MSN4	P33749	630 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	PEX32	P38292	413 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	TAE1	P38340	232 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	FLO5	P38894	1075 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	FAA2	P39518	744 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	INA22	P40576	216 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	ESBP6	P53918	673 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	SPR6	Q01684	191 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	PET117	Q02771	107 aa		4.91	□□□□□ -1.62
UPS3	YDR185C	SSK22	P25390	1331 aa	Predicted RBP	4.91	□□□□□ -1.62
UPS3	YDR185C	VMA5	P31412	392 aa	Known RBP	4.9	□□□□□ -1.63
UPS3	YDR185C	YHR045W	P38775	560 aa		4.9	□□□□□ -1.63
UPS3	YDR185C	BNA6	P43619	295 aa		4.9	□□□□□ -1.63
UPS3	YDR185C	GUF1	P46943	645 aa		4.9	□□□□□ -1.63
UPS3	YDR185C	RRN9	P53437	365 aa		4.9	□□□□□ -1.63
UPS3	YDR185C	BET4	Q00618	327 aa		4.9	□□□□□ -1.63
UPS3	YDR185C	UBX2	Q04228	584 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms