RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC2	YDR180W	GDH1	P07262	454 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	GCD1	P09032	578 aa	Predicted RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	MTF1	P14908	341 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	TPM1	P17536	199 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	SEC22	P22214	214 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	SAT4	P25333	603 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	KIN82	P25341	720 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	RVS161	P25343	265 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	SRO9	P25567	434 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	YUR1	P26725	428 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	BEM1	P29366	551 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	UGP1	P32861	499 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	AUR1	P36107	401 aa	Predicted RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	APT2	P36973	181 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	HMT1	P38074	348 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	CST26	P38226	397 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	HIS2	P38635	335 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	GND1	P38720	489 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	MTG2	P38860	518 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	LYS9	P38999	446 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	PEX7	P39108	375 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	VMA7	P39111	118 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	THO1	P40040	218 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	MMF1	P40185	145 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	OYE3	P41816	400 aa	Predicted RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	MDV1	P47025	714 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	BRO1	P48582	844 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	PEX31	P53203	462 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	BUD9	P53226	547 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	GND2	P53319	492 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	TEX1	P53851	422 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	NUP100	Q02629	959 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	YPL080C	Q02826	108 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	YMR160W	Q03823	816 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	ECM30	Q06673	1274 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	THI20	Q08224	551 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	DDC1	Q08949	612 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	YDL176W	Q12027	708 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	ERG27	Q12452	347 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	AGC1	Q12482	902 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	SEY1	Q99287	776 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	ISN1	Q99312	450 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	CET1	O13297	549 aa	Predicted RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	CDC8	P00572	216 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	MET3	P08536	511 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	ZWF1	P11412	505 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	RPI1	P23250	407 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	AAT2	P23542	418 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	EMC1	P25574	760 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	YCR015C	P25616	317 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	LAC1	P28496	418 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	NDC1	P32500	655 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	YPT7	P32939	208 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	RPT5	P33297	434 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	CTF13	P35203	478 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	ROT2	P38138	954 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	RPP1	P38786	293 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	IPT1	P38954	527 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	FET3	P38993	636 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	BUR6	P40096	142 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	PRM10	P42946	383 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	GNA1	P43577	159 aa	Predicted RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	PMT4	P46971	762 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	IRC8	P47046	822 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	HMS2	P47175	358 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	DAN1	P47178	298 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	POP6	P53218	158 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	DBP6	P53734	629 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	ARG5,6	Q01217	863 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	NRG1	Q03125	231 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	MSC2	Q03455	724 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	PPN1	Q04119	674 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	SEG1	Q04279	960 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	SHH3	Q04487	196 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	ROY1	Q04847	553 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	MCA1	Q08601	432 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	NBP2	Q12163	236 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	CTF3	Q12748	733 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	RAD7	P06779	565 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	SSA3	P09435	649 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	RPS24A	P0CX31	135 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	RPS24B	P0CX32	135 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	PWP1	P21304	576 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	FEN2	P25621	512 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	PMT2	P31382	759 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	NPL6	P32832	435 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	PMT1	P33775	817 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	TVP38	P36164	337 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	TAT1	P38085	619 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	SIF2	P38262	535 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	MSG5	P38590	489 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	KSP1	P38691	1029 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	CTF8	P38877	133 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	HEM14	P40012	539 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	YTA12	P40341	825 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	ATF1	P40353	525 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	CSM2	P40465	213 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	BMT5	P40493	336 aa		0.98	□□□□□ -2.25
SCC2	YDR180W	RPL10	P41805	221 aa	Known RBP	0.98	□□□□□ -2.25
SCC2	YDR180W	PUS4	P48567	403 aa	Known RBP	0.98	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 103.7 ms