RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C ACL4Q03771 387 aa1.22□□□□□ -2.21
CSN9YDR179C YMR155WQ03795 547 aa1.22□□□□□ -2.21
CSN9YDR179C ECM7Q06200 448 aa1.22□□□□□ -2.21
CSN9YDR179C RRI2Q12348 645 aa1.22□□□□□ -2.21
CSN9YDR179C YOP1Q12402 180 aa1.22□□□□□ -2.21
CSN9YDR179C CDC21P06785 304 aa1.21□□□□□ -2.22
CSN9YDR179C RED1P14291 827 aa1.21□□□□□ -2.22
CSN9YDR179C YBR241CP38142 488 aa1.21□□□□□ -2.22
CSN9YDR179C GPX2P38143 162 aa1.21□□□□□ -2.22
CSN9YDR179C GPI16P38875 610 aa1.21□□□□□ -2.22
CSN9YDR179C RRT13P40042 185 aa1.21□□□□□ -2.22
CSN9YDR179C SCC4P40090 624 aa1.21□□□□□ -2.22
CSN9YDR179C ATM1P40416 690 aa1.21□□□□□ -2.22
CSN9YDR179C YIL059CP40520 121 aa1.21□□□□□ -2.22
CSN9YDR179C CAK1P43568 368 aaPredicted RBP1.21□□□□□ -2.22
CSN9YDR179C KEG1P43614 200 aa1.21□□□□□ -2.22
CSN9YDR179C ASN2P49090 572 aaKnown RBP1.21□□□□□ -2.22
CSN9YDR179C SVL3Q03088 825 aaKnown RBP1.21□□□□□ -2.22
CSN9YDR179C ARX1Q03862 593 aaKnown RBP1.21□□□□□ -2.22
CSN9YDR179C YDR131CQ03899 556 aa1.21□□□□□ -2.22
CSN9YDR179C MCT1Q12283 360 aa1.21□□□□□ -2.22
CSN9YDR179C YOL159C-AQ3E769 90 aa1.21□□□□□ -2.22
CSN9YDR179C STE2D6VTK4 431 aa1.2□□□□□ -2.22
CSN9YDR179C SCH9P11792 824 aaKnown RBP1.2□□□□□ -2.22
CSN9YDR179C YCR051WP25631 222 aa1.2□□□□□ -2.22
CSN9YDR179C DBF4P32325 704 aa1.2□□□□□ -2.22
CSN9YDR179C SKG6P32900 734 aaPredicted RBP1.2□□□□□ -2.22
CSN9YDR179C CBF5P33322 483 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
CSN9YDR179C TIR2P33890 251 aa1.2□□□□□ -2.22
CSN9YDR179C ASC1P38011 319 aaKnown RBP1.2□□□□□ -2.22
CSN9YDR179C INM1P38710 295 aa1.2□□□□□ -2.22
CSN9YDR179C GEP4P38812 185 aa1.2□□□□□ -2.22
CSN9YDR179C UFE1P41834 346 aa1.2□□□□□ -2.22
CSN9YDR179C STE24P47154 453 aa1.2□□□□□ -2.22
CSN9YDR179C FSH2Q05015 223 aa1.2□□□□□ -2.22
CSN9YDR179C COX3P00420 269 aa1.19□□□□□ -2.22
CSN9YDR179C TPK3P05986 398 aa1.19□□□□□ -2.22
CSN9YDR179C ARF1P11076 181 aaKnown RBP1.19□□□□□ -2.22
CSN9YDR179C UNG1P12887 359 aa1.19□□□□□ -2.22
CSN9YDR179C SLM5P25345 492 aaKnown RBP1.19□□□□□ -2.22
CSN9YDR179C RPL16AP26784 199 aaKnown RBP1.19□□□□□ -2.22
CSN9YDR179C DOA1P36037 715 aa1.19□□□□□ -2.22
CSN9YDR179C STN1P38960 494 aa1.19□□□□□ -2.22
CSN9YDR179C RBG1P39729 369 aa1.19□□□□□ -2.22
CSN9YDR179C VHS2P40463 436 aa1.19□□□□□ -2.22
CSN9YDR179C SED5Q01590 340 aa1.19□□□□□ -2.22
CSN9YDR179C ROY1Q04847 553 aa1.19□□□□□ -2.22
CSN9YDR179C ASA1Q06822 443 aa1.19□□□□□ -2.22
CSN9YDR179C NSE1Q07913 336 aa1.19□□□□□ -2.22
CSN9YDR179C YRF1-4O13559 1382 aa1.19□□□□□ -2.22
CSN9YDR179C HEM4P06174 275 aa1.18□□□□□ -2.22
CSN9YDR179C DAL5P15365 543 aa1.18□□□□□ -2.22
CSN9YDR179C MSP1P28737 362 aa1.18□□□□□ -2.22
CSN9YDR179C ANP1P32629 500 aa1.18□□□□□ -2.22
CSN9YDR179C CTK3P46963 296 aaPredicted RBP1.18□□□□□ -2.22
CSN9YDR179C BIO3P50277 480 aa1.18□□□□□ -2.22
CSN9YDR179C RMI1Q02685 241 aa1.18□□□□□ -2.22
CSN9YDR179C MRX11Q03079 207 aa1.18□□□□□ -2.22
CSN9YDR179C TAF11Q04226 346 aa1.18□□□□□ -2.22
CSN9YDR179C APC4Q04601 652 aa1.18□□□□□ -2.22
CSN9YDR179C TSR2Q06672 205 aaKnown RBP1.18□□□□□ -2.22
CSN9YDR179C LDS2Q08218 356 aa1.18□□□□□ -2.22
CSN9YDR179C AEP3Q12089 606 aa1.18□□□□□ -2.22
CSN9YDR179C CHA1P25379 360 aaKnown RBP1.17□□□□□ -2.22
CSN9YDR179C NFU1P32860 256 aa1.17□□□□□ -2.22
CSN9YDR179C DBP7P36120 742 aaKnown RBP1.17□□□□□ -2.22
CSN9YDR179C SHE1P38200 338 aa1.17□□□□□ -2.22
CSN9YDR179C ATG12P38316 186 aa1.17□□□□□ -2.22
CSN9YDR179C SEC27P41811 889 aaKnown RBP1.17□□□□□ -2.22
CSN9YDR179C CIN2P46670 268 aa1.17□□□□□ -2.22
CSN9YDR179C PIB2P53191 635 aa1.17□□□□□ -2.22
CSN9YDR179C YGR015CP53208 328 aa1.17□□□□□ -2.22
CSN9YDR179C RRN9P53437 365 aa1.17□□□□□ -2.22
CSN9YDR179C YDR341CQ05506 607 aaKnown RBP1.17□□□□□ -2.22
CSN9YDR179C MMR1Q06324 491 aa1.17□□□□□ -2.22
CSN9YDR179C ATP16Q12165 160 aa1.17□□□□□ -2.22
CSN9YDR179C YAL067W-AQ8TGK6 75 aa1.17□□□□□ -2.22
CSN9YDR179C AFI1Q99222 893 aa1.17□□□□□ -2.22
CSN9YDR179C RIM1P32445 135 aaKnown RBP1.16□□□□□ -2.22
CSN9YDR179C PPQ1P32945 549 aa1.16□□□□□ -2.22
CSN9YDR179C HEL1P36113 551 aa1.16□□□□□ -2.22
CSN9YDR179C SLM4P38247 162 aa1.16□□□□□ -2.22
CSN9YDR179C YPT35P38815 214 aaKnown RBP1.16□□□□□ -2.22
CSN9YDR179C GGC1P38988 300 aa1.16□□□□□ -2.22
CSN9YDR179C SLT2Q00772 484 aa1.16□□□□□ -2.22
CSN9YDR179C ERO1Q03103 563 aa1.16□□□□□ -2.22
CSN9YDR179C GMC1Q04399 608 aa1.16□□□□□ -2.22
CSN9YDR179C VPS54Q12071 889 aa1.16□□□□□ -2.22
CSN9YDR179C YDL109CQ12103 647 aa1.16□□□□□ -2.22
CSN9YDR179C RPL12AP0CX53 165 aaKnown RBP1.15□□□□□ -2.23
CSN9YDR179C RPL12BP0CX54 165 aa1.15□□□□□ -2.23
CSN9YDR179C ARO3P14843 370 aaKnown RBP1.15□□□□□ -2.23
CSN9YDR179C PHO84P25297 587 aaKnown RBP1.15□□□□□ -2.23
CSN9YDR179C ALK2P32789 676 aaPredicted RBP1.15□□□□□ -2.23
CSN9YDR179C TKL2P33315 681 aa1.15□□□□□ -2.23
CSN9YDR179C SDH4P37298 181 aa1.15□□□□□ -2.23
CSN9YDR179C ZTA1P38230 334 aaKnown RBP1.15□□□□□ -2.23
CSN9YDR179C EFM1P38732 585 aa1.15□□□□□ -2.23
CSN9YDR179C PAC11P40960 533 aa1.15□□□□□ -2.23
CSN9YDR179C YJR054WP47114 497 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms