RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C MRP21P38175 177 aa1.49□□□□□ -2.17
SWI5YDR146C HEM14P40012 539 aa1.49□□□□□ -2.17
SWI5YDR146C HAC1P41546 238 aa1.49□□□□□ -2.17
SWI5YDR146C CIN2P46670 268 aa1.49□□□□□ -2.17
SWI5YDR146C CTK3P46963 296 aaPredicted RBP1.49□□□□□ -2.17
SWI5YDR146C RET3P53600 189 aa1.49□□□□□ -2.17
SWI5YDR146C RCF1Q03713 159 aa1.49□□□□□ -2.17
SWI5YDR146C GAT3Q07928 141 aa1.49□□□□□ -2.17
SWI5YDR146C DNL4Q08387 944 aaPredicted RBP1.49□□□□□ -2.17
SWI5YDR146C NAG1Q8TGN9 163 aa1.49□□□□□ -2.17
SWI5YDR146C PRB1P09232 635 aa1.49□□□□□ -2.17
SWI5YDR146C RPS16AP0CX51 143 aaKnown RBP1.49□□□□□ -2.17
SWI5YDR146C RPS16BP0CX52 143 aaKnown RBP1.49□□□□□ -2.17
SWI5YDR146C KAP104P38217 918 aaKnown RBP1.49□□□□□ -2.17
SWI5YDR146C DED81P38707 554 aaKnown RBP1.49□□□□□ -2.17
SWI5YDR146C GEP4P38812 185 aa1.49□□□□□ -2.17
SWI5YDR146C APE4P38821 490 aa1.49□□□□□ -2.17
SWI5YDR146C DFG10P40526 253 aa1.49□□□□□ -2.17
SWI5YDR146C UTP6Q02354 440 aaKnown RBP1.49□□□□□ -2.17
SWI5YDR146C YPL107WQ02873 248 aa1.49□□□□□ -2.17
SWI5YDR146C PCL9Q12477 304 aa1.49□□□□□ -2.17
SWI5YDR146C AIM45Q12480 344 aaKnown RBP1.49□□□□□ -2.17
SWI5YDR146C MEX67Q99257 599 aaKnown RBP1.49□□□□□ -2.17
SWI5YDR146C COX4P04037 155 aa1.48□□□□□ -2.17
SWI5YDR146C SCH9P11792 824 aaKnown RBP1.48□□□□□ -2.17
SWI5YDR146C MSP1P28737 362 aa1.48□□□□□ -2.17
SWI5YDR146C DPH2P32461 534 aa1.48□□□□□ -2.17
SWI5YDR146C LSM12P38828 187 aaKnown RBP1.48□□□□□ -2.17
SWI5YDR146C EPL1P43572 832 aa1.48□□□□□ -2.17
SWI5YDR146C SEH1P53011 349 aaKnown RBP1.48□□□□□ -2.17
SWI5YDR146C TRM112P53738 135 aaPredicted RBP1.48□□□□□ -2.17
SWI5YDR146C VAC7P53950 1165 aa1.48□□□□□ -2.17
SWI5YDR146C MAS2P11914 482 aa1.48□□□□□ -2.17
SWI5YDR146C NOP1P15646 327 aaKnown RBP1.48□□□□□ -2.17
SWI5YDR146C FAR1P21268 830 aa1.48□□□□□ -2.17
SWI5YDR146C UBA1P22515 1024 aaKnown RBP1.48□□□□□ -2.17
SWI5YDR146C DBR1P24309 405 aaKnown RBP1.48□□□□□ -2.17
SWI5YDR146C GRR1P24814 1151 aa1.48□□□□□ -2.17
SWI5YDR146C POT1P27796 417 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
SWI5YDR146C ANP1P32629 500 aa1.48□□□□□ -2.17
SWI5YDR146C DAD2P36162 133 aa1.48□□□□□ -2.17
SWI5YDR146C MRPL27P36526 146 aaPredicted RBP1.48□□□□□ -2.17
SWI5YDR146C TIM17P39515 158 aa1.48□□□□□ -2.17
SWI5YDR146C SEC27P41811 889 aaKnown RBP1.48□□□□□ -2.17
SWI5YDR146C YGR018CP53211 109 aa1.48□□□□□ -2.17
SWI5YDR146C YNR068CP53754 272 aa1.48□□□□□ -2.17
SWI5YDR146C SFM1Q12314 213 aa1.48□□□□□ -2.17
SWI5YDR146C TFB5Q3E7C1 72 aaPredicted RBP1.48□□□□□ -2.17
SWI5YDR146C RPL6BP05739 176 aaKnown RBP1.47□□□□□ -2.17
SWI5YDR146C RPS18AP0CX55 146 aaKnown RBP1.47□□□□□ -2.17
SWI5YDR146C RPS18BP0CX56 146 aaPredicted RBP1.47□□□□□ -2.17
SWI5YDR146C ZRC1P20107 442 aa1.47□□□□□ -2.17
SWI5YDR146C MRPL8P22353 238 aa1.47□□□□□ -2.17
SWI5YDR146C GIT1P25346 518 aa1.47□□□□□ -2.17
SWI5YDR146C RDS1P25611 832 aa1.47□□□□□ -2.17
SWI5YDR146C GDT1P38301 280 aaPredicted RBP1.47□□□□□ -2.17
SWI5YDR146C VHT1P53241 593 aa1.47□□□□□ -2.17
SWI5YDR146C RPL6AQ02326 176 aaKnown RBP1.47□□□□□ -2.17
SWI5YDR146C ERO1Q03103 563 aa1.47□□□□□ -2.17
SWI5YDR146C LIP2Q06005 328 aa1.47□□□□□ -2.17
SWI5YDR146C SLM3Q12093 417 aa1.47□□□□□ -2.17
SWI5YDR146C FRE6Q12473 712 aa1.47□□□□□ -2.17
SWI5YDR146C CBP6P07253 162 aaPredicted RBP1.46□□□□□ -2.18
SWI5YDR146C DEP1P31385 405 aa1.46□□□□□ -2.18
SWI5YDR146C MSK1P32048 576 aa1.46□□□□□ -2.18
SWI5YDR146C YHR122WP38829 231 aa1.46□□□□□ -2.18
SWI5YDR146C WSS1P38838 269 aa1.46□□□□□ -2.18
SWI5YDR146C SEO1P39709 593 aa1.46□□□□□ -2.18
SWI5YDR146C YNL208WP40159 199 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C LYS12P40495 371 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C AIP1P46680 615 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C EFM3P47163 339 aa1.46□□□□□ -2.18
SWI5YDR146C TRF5P48561 642 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C YPS5P53057 165 aa1.46□□□□□ -2.18
SWI5YDR146C EOS1P53938 366 aa1.46□□□□□ -2.18
SWI5YDR146C REX2P54964 269 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C PRP38Q00723 242 aaPredicted RBP1.46□□□□□ -2.18
SWI5YDR146C MRPS16Q02608 121 aa1.46□□□□□ -2.18
SWI5YDR146C PIN3Q06449 215 aa1.46□□□□□ -2.18
SWI5YDR146C YLH47Q06493 454 aa1.46□□□□□ -2.18
SWI5YDR146C YOR376WQ08900 122 aa1.46□□□□□ -2.18
SWI5YDR146C HIF1Q12373 385 aa1.46□□□□□ -2.18
SWI5YDR146C YDL012CQ12489 107 aa1.46□□□□□ -2.18
SWI5YDR146C HTZ1Q12692 134 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C DET1Q99288 334 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C ADH1P00330 348 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C EFB1P32471 206 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C ZUO1P32527 433 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C SSE1P32589 693 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C SEC9P40357 651 aa1.46□□□□□ -2.18
SWI5YDR146C ALF1P53904 254 aa1.46□□□□□ -2.18
SWI5YDR146C ENT5Q03769 411 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C MSC3Q05812 728 aa1.46□□□□□ -2.18
SWI5YDR146C DBP9Q06218 594 aaKnown RBP1.46□□□□□ -2.18
SWI5YDR146C YDR061WQ12298 539 aa1.46□□□□□ -2.18
SWI5YDR146C HEM4P06174 275 aa1.45□□□□□ -2.18
SWI5YDR146C TOA1P32773 286 aa1.45□□□□□ -2.18
SWI5YDR146C ECT1P33412 323 aa1.45□□□□□ -2.18
SWI5YDR146C SIF2P38262 535 aa1.45□□□□□ -2.18
SWI5YDR146C PFS1P38872 237 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms