RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C YOR012WQ12351 137 aa4.79□□□□□ -1.64
SCM3YDL139C PFK27Q12471 397 aaPredicted RBP4.79□□□□□ -1.64
SCM3YDL139C SEC39Q12745 709 aa4.79□□□□□ -1.64
SCM3YDL139C YMR084WA2P2R3 262 aa4.78□□□□□ -1.64
SCM3YDL139C THP2O13539 261 aaKnown RBP4.78□□□□□ -1.64
SCM3YDL139C YCK1P23291 538 aa4.78□□□□□ -1.64
SCM3YDL139C PEX3P28795 441 aa4.78□□□□□ -1.64
SCM3YDL139C PET309P32522 965 aaPredicted RBP4.78□□□□□ -1.64
SCM3YDL139C CAT2P32796 670 aaKnown RBP4.78□□□□□ -1.64
SCM3YDL139C COX13P32799 129 aa4.78□□□□□ -1.64
SCM3YDL139C SPO23P33757 523 aa4.78□□□□□ -1.64
SCM3YDL139C RPF2P36160 344 aaKnown RBP4.78□□□□□ -1.64
SCM3YDL139C ECM8P38246 354 aa4.78□□□□□ -1.64
SCM3YDL139C RCK1P38622 512 aa4.78□□□□□ -1.64
SCM3YDL139C TDA11P38854 504 aa4.78□□□□□ -1.64
SCM3YDL139C PRM10P42946 383 aa4.78□□□□□ -1.64
SCM3YDL139C ATP22P50273 684 aaPredicted RBP4.78□□□□□ -1.64
SCM3YDL139C YGR079WP53249 370 aa4.78□□□□□ -1.64
SCM3YDL139C YNL181WP53878 407 aa4.78□□□□□ -1.64
SCM3YDL139C IDP3P53982 420 aaKnown RBP4.78□□□□□ -1.64
SCM3YDL139C ARG7Q04728 441 aa4.78□□□□□ -1.64
SCM3YDL139C YMR034CQ05131 434 aaPredicted RBP4.78□□□□□ -1.64
SCM3YDL139C RRP40Q08285 240 aaKnown RBP4.78□□□□□ -1.64
SCM3YDL139C GET4Q12125 312 aa4.78□□□□□ -1.64
SCM3YDL139C BSC1Q12140 328 aa4.78□□□□□ -1.64
SCM3YDL139C RRP42Q12277 265 aaPredicted RBP4.78□□□□□ -1.64
SCM3YDL139C IES3Q12345 250 aa4.78□□□□□ -1.64
SCM3YDL139C YPR064WQ12492 139 aa4.78□□□□□ -1.64
SCM3YDL139C FMP27Q06179 2628 aa4.78□□□□□ -1.64
SCM3YDL139C MSB2P32334 1306 aa4.77□□□□□ -1.65
SCM3YDL139C CMK2P22517 447 aa4.77□□□□□ -1.65
SCM3YDL139C MKK1P32490 508 aa4.77□□□□□ -1.65
SCM3YDL139C GDH2P33327 1092 aaKnown RBP4.77□□□□□ -1.65
SCM3YDL139C FMP46P36141 133 aaKnown RBP4.77□□□□□ -1.65
SCM3YDL139C YHR097CP38809 366 aaKnown RBP4.77□□□□□ -1.65
SCM3YDL139C COG3P40094 801 aa4.77□□□□□ -1.65
SCM3YDL139C PDS1P40316 373 aaPredicted RBP4.77□□□□□ -1.65
SCM3YDL139C ZIM17P42844 174 aa4.77□□□□□ -1.65
SCM3YDL139C TOS2P50078 622 aa4.77□□□□□ -1.65
SCM3YDL139C MDM34P53083 459 aa4.77□□□□□ -1.65
SCM3YDL139C HOS2P53096 452 aaPredicted RBP4.77□□□□□ -1.65
SCM3YDL139C YAP1802P53309 568 aa4.77□□□□□ -1.65
SCM3YDL139C YNL095CP53932 642 aa4.77□□□□□ -1.65
SCM3YDL139C CTL1Q03220 320 aaKnown RBP4.77□□□□□ -1.65
SCM3YDL139C VHS1Q03785 461 aa4.77□□□□□ -1.65
SCM3YDL139C SWF1Q04629 336 aa4.77□□□□□ -1.65
SCM3YDL139C IZH3Q07959 543 aa4.77□□□□□ -1.65
SCM3YDL139C ACF2Q12168 779 aa4.77□□□□□ -1.65
SCM3YDL139C GTT2Q12390 233 aa4.77□□□□□ -1.65
SCM3YDL139C MEX67Q99257 599 aaKnown RBP4.77□□□□□ -1.65
SCM3YDL139C INH1P01097 85 aa4.76□□□□□ -1.65
SCM3YDL139C PUT2P07275 575 aa4.76□□□□□ -1.65
SCM3YDL139C TYR1P20049 452 aa4.76□□□□□ -1.65
SCM3YDL139C PPH21P23594 369 aa4.76□□□□□ -1.65
SCM3YDL139C PHO84P25297 587 aaKnown RBP4.76□□□□□ -1.65
SCM3YDL139C MXR2P25566 168 aa4.76□□□□□ -1.65
SCM3YDL139C RPN2P32565 945 aaKnown RBP4.76□□□□□ -1.65
SCM3YDL139C PTR2P32901 601 aa4.76□□□□□ -1.65
SCM3YDL139C YPT52P36018 234 aaKnown RBP4.76□□□□□ -1.65
SCM3YDL139C AUR1P36107 401 aaPredicted RBP4.76□□□□□ -1.65
SCM3YDL139C YBR241CP38142 488 aa4.76□□□□□ -1.65
SCM3YDL139C BNA4P38169 460 aa4.76□□□□□ -1.65
SCM3YDL139C RRN10P38204 145 aa4.76□□□□□ -1.65
SCM3YDL139C RCY1P39531 840 aa4.76□□□□□ -1.65
SCM3YDL139C FAU1P40099 211 aa4.76□□□□□ -1.65
SCM3YDL139C YNL208WP40159 199 aaKnown RBP4.76□□□□□ -1.65
SCM3YDL139C YPS6P40583 537 aa4.76□□□□□ -1.65
SCM3YDL139C SSU1P41930 458 aa4.76□□□□□ -1.65
SCM3YDL139C ROG1P53118 685 aa4.76□□□□□ -1.65
SCM3YDL139C YGL108CP53139 140 aa4.76□□□□□ -1.65
SCM3YDL139C YGR054WP53235 642 aaKnown RBP4.76□□□□□ -1.65
SCM3YDL139C ZRG17P53735 605 aa4.76□□□□□ -1.65
SCM3YDL139C PEX12Q04370 399 aa4.76□□□□□ -1.65
SCM3YDL139C VPS74Q06385 345 aa4.76□□□□□ -1.65
SCM3YDL139C ARR3Q06598 404 aa4.76□□□□□ -1.65
SCM3YDL139C YDL086WQ07505 273 aa4.76□□□□□ -1.65
SCM3YDL139C YDL121CQ07541 149 aa4.76□□□□□ -1.65
SCM3YDL139C PSR1Q07800 427 aa4.76□□□□□ -1.65
SCM3YDL139C PLB3Q08108 686 aa4.76□□□□□ -1.65
SCM3YDL139C CLP1Q08685 445 aaPredicted RBP4.76□□□□□ -1.65
SCM3YDL139C YOR114WQ12219 294 aa4.76□□□□□ -1.65
SCM3YDL139C RPN5Q12250 445 aaKnown RBP4.76□□□□□ -1.65
SCM3YDL139C TAF3Q12297 353 aa4.76□□□□□ -1.65
SCM3YDL139C VCX1Q99385 411 aa4.76□□□□□ -1.65
SCM3YDL139C Q0010Q9ZZX9 128 aa4.76□□□□□ -1.65
SCM3YDL139C POL2P21951 2222 aaKnown RBP4.76□□□□□ -1.65
SCM3YDL139C YKR104WP0CE69 306 aa4.75□□□□□ -1.65
SCM3YDL139C CHA1P25379 360 aaKnown RBP4.75□□□□□ -1.65
SCM3YDL139C DMC1P25453 334 aa4.75□□□□□ -1.65
SCM3YDL139C NTH1P32356 751 aa4.75□□□□□ -1.65
SCM3YDL139C ELF1P36053 145 aa4.75□□□□□ -1.65
SCM3YDL139C YCR087C-AP37263 153 aa4.75□□□□□ -1.65
SCM3YDL139C MNN2P38069 597 aa4.75□□□□□ -1.65
SCM3YDL139C YHR177WP38867 453 aa4.75□□□□□ -1.65
SCM3YDL139C RBG1P39729 369 aa4.75□□□□□ -1.65
SCM3YDL139C GIM4P40005 111 aaKnown RBP4.75□□□□□ -1.65
SCM3YDL139C MEP1P40260 492 aa4.75□□□□□ -1.65
SCM3YDL139C LRO1P40345 661 aa4.75□□□□□ -1.65
SCM3YDL139C YGR151CP53287 111 aa4.75□□□□□ -1.65
SCM3YDL139C YNL260CP53846 198 aa4.75□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms