RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C ERO1Q03103 563 aa2.47□□□□□ -2.01
PBP4YDL053C VHS1Q03785 461 aa2.47□□□□□ -2.01
PBP4YDL053C YHC1Q05900 231 aaKnown RBP2.47□□□□□ -2.01
PBP4YDL053C IPK1Q06667 281 aa2.47□□□□□ -2.01
PBP4YDL053C MEX67Q99257 599 aaKnown RBP2.47□□□□□ -2.01
PBP4YDL053C CCH1P50077 2039 aa2.47□□□□□ -2.01
PBP4YDL053C RRP7P25368 297 aaPredicted RBP2.46□□□□□ -2.02
PBP4YDL053C CHA1P25379 360 aaKnown RBP2.46□□□□□ -2.02
PBP4YDL053C MDL1P33310 695 aa2.46□□□□□ -2.02
PBP4YDL053C GPI18P38211 433 aa2.46□□□□□ -2.02
PBP4YDL053C GDI1P39958 451 aaKnown RBP2.46□□□□□ -2.02
PBP4YDL053C IGD1P43598 195 aa2.46□□□□□ -2.02
PBP4YDL053C YPS5P53057 165 aa2.46□□□□□ -2.02
PBP4YDL053C MKC7P53379 596 aa2.46□□□□□ -2.02
PBP4YDL053C DEP1P31385 405 aa2.45□□□□□ -2.02
PBP4YDL053C SEC27P41811 889 aaKnown RBP2.45□□□□□ -2.02
PBP4YDL053C KEG1P43614 200 aa2.45□□□□□ -2.02
PBP4YDL053C AIP1P46680 615 aaKnown RBP2.45□□□□□ -2.02
PBP4YDL053C TRF5P48561 642 aaKnown RBP2.45□□□□□ -2.02
PBP4YDL053C YGL262WP53054 175 aa2.45□□□□□ -2.02
PBP4YDL053C YGR018CP53211 109 aa2.45□□□□□ -2.02
PBP4YDL053C REX2P54964 269 aaKnown RBP2.45□□□□□ -2.02
PBP4YDL053C MCT1Q12283 360 aa2.45□□□□□ -2.02
PBP4YDL053C YBL111CQ3E7Y5 667 aa2.45□□□□□ -2.02
PBP4YDL053C SRN2Q99176 213 aa2.45□□□□□ -2.02
PBP4YDL053C ADH1P00330 348 aaKnown RBP2.44□□□□□ -2.02
PBP4YDL053C CBP6P07253 162 aaPredicted RBP2.44□□□□□ -2.02
PBP4YDL053C RPS18AP0CX55 146 aaKnown RBP2.44□□□□□ -2.02
PBP4YDL053C RPS18BP0CX56 146 aaPredicted RBP2.44□□□□□ -2.02
PBP4YDL053C CMK2P22517 447 aa2.44□□□□□ -2.02
PBP4YDL053C GIT1P25346 518 aa2.44□□□□□ -2.02
PBP4YDL053C PEX5P35056 612 aa2.44□□□□□ -2.02
PBP4YDL053C MRPL27P36526 146 aaPredicted RBP2.44□□□□□ -2.02
PBP4YDL053C MRPS9P38120 278 aa2.44□□□□□ -2.02
PBP4YDL053C LSM12P38828 187 aaKnown RBP2.44□□□□□ -2.02
PBP4YDL053C HEM14P40012 539 aa2.44□□□□□ -2.02
PBP4YDL053C SEC28P40509 296 aaKnown RBP2.44□□□□□ -2.02
PBP4YDL053C CIN2P46670 268 aa2.44□□□□□ -2.02
PBP4YDL053C MLC1P53141 149 aa2.44□□□□□ -2.02
PBP4YDL053C ENT5Q03769 411 aaKnown RBP2.44□□□□□ -2.02
PBP4YDL053C GAT3Q07928 141 aa2.44□□□□□ -2.02
PBP4YDL053C YPQ1Q12010 308 aa2.44□□□□□ -2.02
PBP4YDL053C FOL3Q12676 427 aaPredicted RBP2.44□□□□□ -2.02
PBP4YDL053C EPL1P43572 832 aa2.43□□□□□ -2.02
PBP4YDL053C CTK3P46963 296 aaPredicted RBP2.43□□□□□ -2.02
PBP4YDL053C PRP38Q00723 242 aaPredicted RBP2.43□□□□□ -2.02
PBP4YDL053C TPS1Q00764 495 aaKnown RBP2.43□□□□□ -2.02
PBP4YDL053C MSC3Q05812 728 aa2.43□□□□□ -2.02
PBP4YDL053C STE7P06784 515 aa2.42□□□□□ -2.02
PBP4YDL053C JEM1P40358 645 aa2.42□□□□□ -2.02
PBP4YDL053C SEH1P53011 349 aaKnown RBP2.42□□□□□ -2.02
PBP4YDL053C VAC7P53950 1165 aa2.42□□□□□ -2.02
PBP4YDL053C KTR6P54070 446 aa2.42□□□□□ -2.02
PBP4YDL053C YMR010WQ03687 405 aa2.42□□□□□ -2.02
PBP4YDL053C ECM11Q04110 302 aa2.42□□□□□ -2.02
PBP4YDL053C MCH1Q07376 486 aa2.42□□□□□ -2.02
PBP4YDL053C YFH1Q07540 174 aa2.42□□□□□ -2.02
PBP4YDL053C HMS1Q12398 434 aa2.42□□□□□ -2.02
PBP4YDL053C MRPL8P22353 238 aa2.41□□□□□ -2.02
PBP4YDL053C PUP2P32379 260 aa2.41□□□□□ -2.02
PBP4YDL053C DPH2P32461 534 aa2.41□□□□□ -2.02
PBP4YDL053C ANP1P32629 500 aa2.41□□□□□ -2.02
PBP4YDL053C SOL2P37262 315 aa2.41□□□□□ -2.02
PBP4YDL053C BMT2P38278 337 aa2.41□□□□□ -2.02
PBP4YDL053C WSC4P38739 605 aa2.41□□□□□ -2.02
PBP4YDL053C VHT1P53241 593 aa2.41□□□□□ -2.02
PBP4YDL053C RNY1Q02933 434 aaKnown RBP2.41□□□□□ -2.02
PBP4YDL053C YPR078CQ06813 372 aa2.41□□□□□ -2.02
PBP4YDL053C YDR061WQ12298 539 aa2.41□□□□□ -2.02
PBP4YDL053C SFM1Q12314 213 aa2.41□□□□□ -2.02
PBP4YDL053C RPL16AP26784 199 aaKnown RBP2.4□□□□□ -2.03
PBP4YDL053C PSO2P30620 661 aa2.4□□□□□ -2.03
PBP4YDL053C SSE1P32589 693 aaKnown RBP2.4□□□□□ -2.03
PBP4YDL053C ECT1P33412 323 aa2.4□□□□□ -2.03
PBP4YDL053C WSS1P38838 269 aa2.4□□□□□ -2.03
PBP4YDL053C YLR177WQ06251 628 aa2.4□□□□□ -2.03
PBP4YDL053C YLH47Q06493 454 aa2.4□□□□□ -2.03
PBP4YDL053C SHS1Q07657 551 aa2.4□□□□□ -2.03
PBP4YDL053C YDL109CQ12103 647 aa2.4□□□□□ -2.03
PBP4YDL053C RPL6BP05739 176 aaKnown RBP2.39□□□□□ -2.03
PBP4YDL053C HEM4P06174 275 aa2.39□□□□□ -2.03
PBP4YDL053C MAS2P11914 482 aa2.39□□□□□ -2.03
PBP4YDL053C TOA1P32773 286 aa2.39□□□□□ -2.03
PBP4YDL053C RXT2P38255 430 aa2.39□□□□□ -2.03
PBP4YDL053C YSW1P38280 609 aa2.39□□□□□ -2.03
PBP4YDL053C SEC9P40357 651 aa2.39□□□□□ -2.03
PBP4YDL053C LYS12P40495 371 aaKnown RBP2.39□□□□□ -2.03
PBP4YDL053C RET3P53600 189 aa2.39□□□□□ -2.03
PBP4YDL053C RPL6AQ02326 176 aaKnown RBP2.39□□□□□ -2.03
PBP4YDL053C RPL21AQ02753 160 aaKnown RBP2.39□□□□□ -2.03
PBP4YDL053C FSH2Q05015 223 aa2.39□□□□□ -2.03
PBP4YDL053C PEX27Q08580 376 aa2.39□□□□□ -2.03
PBP4YDL053C YOR376WQ08900 122 aa2.39□□□□□ -2.03
PBP4YDL053C ATP16Q12165 160 aa2.39□□□□□ -2.03
PBP4YDL053C RPL21BQ12672 160 aaKnown RBP2.39□□□□□ -2.03
PBP4YDL053C YOR338WQ99326 363 aa2.39□□□□□ -2.03
PBP4YDL053C RPL23AP0CX41 137 aaKnown RBP2.38□□□□□ -2.03
PBP4YDL053C RPL23BP0CX42 137 aaKnown RBP2.38□□□□□ -2.03
PBP4YDL053C SCH9P11792 824 aaKnown RBP2.38□□□□□ -2.03
PBP4YDL053C DAP2P18962 818 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms