RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W GPX2P38143 162 aa1.31□□□□□ -2.2
HMRA1YCR097W TRM112P53738 135 aaPredicted RBP1.31□□□□□ -2.2
HMRA1YCR097W PLB3Q08108 686 aa1.31□□□□□ -2.2
HMRA1YCR097W CHA1P25379 360 aaKnown RBP1.3□□□□□ -2.2
HMRA1YCR097W GPI16P38875 610 aa1.3□□□□□ -2.2
HMRA1YCR097W RBG1P39729 369 aa1.3□□□□□ -2.2
HMRA1YCR097W YDL211CQ12121 372 aa1.3□□□□□ -2.2
HMRA1YCR097W FLO11P08640 1367 aa1.3□□□□□ -2.2
HMRA1YCR097W UNG1P12887 359 aa1.29□□□□□ -2.2
HMRA1YCR097W LDS1P31379 325 aa1.29□□□□□ -2.2
HMRA1YCR097W SED5Q01590 340 aa1.29□□□□□ -2.2
HMRA1YCR097W CDD1Q06549 142 aa1.29□□□□□ -2.2
HMRA1YCR097W STE2D6VTK4 431 aa1.28□□□□□ -2.2
HMRA1YCR097W DPB3P27344 201 aa1.28□□□□□ -2.2
HMRA1YCR097W SHE1P38200 338 aa1.28□□□□□ -2.2
HMRA1YCR097W ECM14P38836 430 aa1.28□□□□□ -2.2
HMRA1YCR097W BDH1P39714 382 aa1.28□□□□□ -2.2
HMRA1YCR097W ARF3P40994 183 aaRIP-Chip data1.28□□□□□ -2.2not detected
HMRA1YCR097W YGR015CP53208 328 aa1.28□□□□□ -2.2
HMRA1YCR097W SKO1Q02100 647 aa1.28□□□□□ -2.2
HMRA1YCR097W FSH2Q05015 223 aa1.28□□□□□ -2.2
HMRA1YCR097W IMH1Q06704 911 aaKnown RBP1.28□□□□□ -2.2
HMRA1YCR097W COX3P00420 269 aa1.27□□□□□ -2.21
HMRA1YCR097W COX10P21592 462 aa1.27□□□□□ -2.21
HMRA1YCR097W MCR1P36060 302 aaKnown RBP1.27□□□□□ -2.21
HMRA1YCR097W YER079WP40052 210 aaKnown RBP1.27□□□□□ -2.21
HMRA1YCR097W MMF1P40185 145 aaKnown RBP1.27□□□□□ -2.21
HMRA1YCR097W CIN2P46670 268 aa1.27□□□□□ -2.21
HMRA1YCR097W BAT2P47176 376 aaKnown RBP1.27□□□□□ -2.21
HMRA1YCR097W CUP2P15315 225 aa1.26□□□□□ -2.21
HMRA1YCR097W TIR2P33890 251 aa1.26□□□□□ -2.21
HMRA1YCR097W MNN5P46982 586 aa1.26□□□□□ -2.21
HMRA1YCR097W TIM10P87108 93 aa1.26□□□□□ -2.21
HMRA1YCR097W KAP120Q02932 1032 aa1.26□□□□□ -2.21
HMRA1YCR097W YDR131CQ03899 556 aa1.26□□□□□ -2.21
HMRA1YCR097W YOL029CQ08187 201 aa1.26□□□□□ -2.21
HMRA1YCR097W ATP16Q12165 160 aa1.26□□□□□ -2.21
HMRA1YCR097W URA4P20051 364 aa1.25□□□□□ -2.21
HMRA1YCR097W CLB1P24868 471 aa1.25□□□□□ -2.21
HMRA1YCR097W BRF1P29056 596 aa1.25□□□□□ -2.21
HMRA1YCR097W YKR032WP36127 104 aa1.25□□□□□ -2.21
HMRA1YCR097W UTP9P38882 575 aaKnown RBP1.25□□□□□ -2.21
HMRA1YCR097W VHS2P40463 436 aa1.25□□□□□ -2.21
HMRA1YCR097W CLP1Q08685 445 aaPredicted RBP1.25□□□□□ -2.21
HMRA1YCR097W DST1P07273 309 aa1.24□□□□□ -2.21
HMRA1YCR097W CPT1P17898 393 aa1.24□□□□□ -2.21
HMRA1YCR097W COS9P36034 407 aa1.24□□□□□ -2.21
HMRA1YCR097W GEP4P38812 185 aa1.24□□□□□ -2.21
HMRA1YCR097W YJR054WP47114 497 aa1.24□□□□□ -2.21
HMRA1YCR097W OCA2P53949 197 aa1.24□□□□□ -2.21
HMRA1YCR097W YPL113CQ02961 396 aa1.24□□□□□ -2.21
HMRA1YCR097W RPN9Q04062 393 aaKnown RBP1.24□□□□□ -2.21
HMRA1YCR097W MEX67Q99257 599 aaKnown RBP1.24□□□□□ -2.21
HMRA1YCR097W HPR1P17629 752 aaKnown RBP1.23□□□□□ -2.21
HMRA1YCR097W SMD1Q02260 146 aaPredicted RBP1.23□□□□□ -2.21
HMRA1YCR097W YMR010WQ03687 405 aa1.23□□□□□ -2.21
HMRA1YCR097W API2Q04413 109 aa1.23□□□□□ -2.21
HMRA1YCR097W APC4Q04601 652 aa1.23□□□□□ -2.21
HMRA1YCR097W YOP1Q12402 180 aa1.23□□□□□ -2.21
HMRA1YCR097W RTN2Q12443 393 aa1.23□□□□□ -2.21
HMRA1YCR097W CDH1P53197 566 aa1.22□□□□□ -2.21
HMRA1YCR097W DCS1Q06151 350 aa1.22□□□□□ -2.21
HMRA1YCR097W MET17P06106 444 aa1.21□□□□□ -2.22
HMRA1YCR097W YMR262WP38430 313 aa1.21□□□□□ -2.22
HMRA1YCR097W GGC1P38988 300 aa1.21□□□□□ -2.22
HMRA1YCR097W HSH155P49955 971 aaKnown RBP1.21□□□□□ -2.22
HMRA1YCR097W SHE4P51534 789 aa1.21□□□□□ -2.22
HMRA1YCR097W RRN9P53437 365 aa1.21□□□□□ -2.22
HMRA1YCR097W PRM1P53835 661 aa1.21□□□□□ -2.22
HMRA1YCR097W RLP24Q07915 199 aaKnown RBP1.21□□□□□ -2.22
HMRA1YCR097W STE24P47154 453 aa1.2□□□□□ -2.22
HMRA1YCR097W YMR130WQ04223 302 aa1.2□□□□□ -2.22
HMRA1YCR097W HEM4P06174 275 aa1.19□□□□□ -2.22
HMRA1YCR097W ROX1P25042 368 aa1.19□□□□□ -2.22
HMRA1YCR097W SAS3P34218 831 aa1.19□□□□□ -2.22
HMRA1YCR097W CAK1P43568 368 aaPredicted RBP1.19□□□□□ -2.22
HMRA1YCR097W TOS2P50078 622 aa1.19□□□□□ -2.22
HMRA1YCR097W PRP42Q03776 544 aaKnown RBP1.19□□□□□ -2.22
HMRA1YCR097W GMC1Q04399 608 aa1.19□□□□□ -2.22
HMRA1YCR097W YOL159C-AQ3E769 90 aa1.19□□□□□ -2.22
HMRA1YCR097W MET2P08465 486 aa1.18□□□□□ -2.22
HMRA1YCR097W NAS6P50086 228 aa1.18□□□□□ -2.22
HMRA1YCR097W PIB2P53191 635 aa1.18□□□□□ -2.22
HMRA1YCR097W RUP1Q12242 671 aa1.18□□□□□ -2.22
HMRA1YCR097W PRP46Q12417 451 aaPredicted RBP1.18□□□□□ -2.22
HMRA1YCR097W ABM1P47146 123 aa1.17□□□□□ -2.22
HMRA1YCR097W ROG1P53118 685 aa1.17□□□□□ -2.22
HMRA1YCR097W CWC22P53333 577 aaKnown RBP1.17□□□□□ -2.22
HMRA1YCR097W SLT2Q00772 484 aa1.17□□□□□ -2.22
HMRA1YCR097W ARX1Q03862 593 aaKnown RBP1.17□□□□□ -2.22
HMRA1YCR097W CKA1P15790 372 aa1.16□□□□□ -2.22
HMRA1YCR097W TIP20P33891 701 aa1.16□□□□□ -2.22
HMRA1YCR097W MED6P38782 295 aa1.16□□□□□ -2.22
HMRA1YCR097W SMC2P38989 1170 aaKnown RBP1.16□□□□□ -2.22
HMRA1YCR097W PCL7P40186 285 aa1.16□□□□□ -2.22
HMRA1YCR097W ATM1P40416 690 aa1.16□□□□□ -2.22
HMRA1YCR097W YPL080CQ02826 108 aa1.16□□□□□ -2.22
HMRA1YCR097W GTO3Q04806 366 aa1.16□□□□□ -2.22
HMRA1YCR097W DON1Q05610 365 aa1.16□□□□□ -2.22
HMRA1YCR097W TDH2P00358 332 aaKnown RBP1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms