RNA–Protein interactions for RNA: YBL005W-B

YBL005W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YBL005W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBL005W-BYBL005W-B SHY1P53266 389 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B MPA43P53583 542 aaPredicted RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B PEX25Q02969 394 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B FIN1Q03898 291 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B ENB1Q08299 606 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B YOR022CQ12204 715 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B PSF1Q12488 208 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B ATG40Q99325 256 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B IRC20Q06554 1556 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B NUC1P08466 329 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B TRM1P15565 570 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B HYP2P23301 157 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B RPB9P27999 122 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B MDL1P33310 695 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B YKL071WP36086 256 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B YCR087C-AP37263 153 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B ARN2P38724 620 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B SEN34P39707 275 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B ERG26P53199 349 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B SDC1Q03323 175 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B YMR027WQ04371 470 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B YPS7Q06325 596 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B INP54Q08227 384 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B TMA46Q12000 345 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B JLP1Q12358 412 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B MF(ALPHA)2P32435 120 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B NRP1P32770 719 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
YBL005W-BYBL005W-B SSO2P39926 295 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B VPS27P40343 622 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B OST3P48439 350 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B UBC9P50623 157 aaPredicted RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B RNH70P53331 553 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B BSC5P53755 489 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B LGE1Q02796 332 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B YPR147CQ06522 304 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B SYT1Q06836 1226 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B LDS2Q08218 356 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B GPB1Q08886 897 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B RPN6Q12377 434 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B SAS5Q99314 248 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B PDR15Q04182 1529 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B CHS1P08004 1131 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B FUM1P08417 488 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B PPA2P28239 310 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B AGA2P32781 87 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B YKT6P36015 200 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B PFS1P38872 237 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B GPP1P41277 250 aaKnown RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B MOB2P43563 287 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B VHT1P53241 593 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B MTG1Q03151 367 aaPredicted RBP2.37□□□□□ -2.03
YBL005W-BYBL005W-B HPF1Q05164 967 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B SKS1Q12505 502 aa2.37□□□□□ -2.03
YBL005W-BYBL005W-B ALG1P16661 449 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B GLK1P17709 500 aaKnown RBP2.36□□□□□ -2.03
YBL005W-BYBL005W-B SPB4P25808 606 aaPredicted RBP2.36□□□□□ -2.03
YBL005W-BYBL005W-B ATG14P38270 344 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B MUP3P38734 546 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B TCD1P38756 429 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B END3P39013 349 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B COG3P40094 801 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B NUP82P40368 713 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B PAN6P40459 309 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B PCI8P40512 444 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B IMO32P53219 342 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B UBC7Q02159 165 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B YOR365CQ08844 703 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B YLL056CQ12177 298 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B MSL5Q12186 476 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
YBL005W-BYBL005W-B SFM1Q12314 213 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B YOL114CQ12322 202 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B RAD1P06777 1100 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B TAL1P15019 335 aaKnown RBP2.36□□□□□ -2.03
YBL005W-BYBL005W-B GLN3P18494 730 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B TRK2P28584 889 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B MRP20P32387 263 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B CAF4P36130 643 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B YBR056WP38081 501 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B FAT1P38225 669 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B RCK1P38622 512 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B PTC7P38797 343 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B PSD1P39006 500 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B TAF4P50105 388 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B BRR6P53062 197 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B DMA2P53924 522 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B STD1Q02794 444 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B PEX30Q06169 523 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B YLR053CQ12026 108 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B TRP3P00937 484 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B RPS4AP0CX35 261 aaKnown RBP2.36□□□□□ -2.03
YBL005W-BYBL005W-B RPS4BP0CX36 261 aaKnown RBP2.36□□□□□ -2.03
YBL005W-BYBL005W-B VPS33P20795 691 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B CLB4P24871 460 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B FLR1P38124 548 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B YCK3P39962 524 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B THO1P40040 218 aaKnown RBP2.36□□□□□ -2.03
YBL005W-BYBL005W-B LYS12P40495 371 aaKnown RBP2.36□□□□□ -2.03
YBL005W-BYBL005W-B AGX1P43567 385 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B PHO86P46956 311 aa2.36□□□□□ -2.03
YBL005W-BYBL005W-B ALG13P53178 202 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms