RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 HAC1P41546 238 aa7.18□□□□□ -1.26
NME1NME1 TLG2Q08144 397 aa7.18□□□□□ -1.26
NME1NME1 TMS1Q12116 473 aa7.18□□□□□ -1.26
NME1NME1 AIM45Q12480 344 aaKnown RBP7.18□□□□□ -1.26
NME1NME1 YOR338WQ99326 363 aa7.18□□□□□ -1.26
NME1NME1 YHK8P38776 514 aa7.17□□□□□ -1.26
NME1NME1 SEC27P41811 889 aaKnown RBP7.17□□□□□ -1.26
NME1NME1 YJR085CP47131 105 aaKnown RBP7.17□□□□□ -1.26
NME1NME1 ABM1P47146 123 aa7.17□□□□□ -1.26
NME1NME1 YGL242CP53066 181 aa7.17□□□□□ -1.26
NME1NME1 RTN1Q04947 295 aaKnown RBP7.17□□□□□ -1.26
NME1NME1 ARR1Q06596 294 aa7.17□□□□□ -1.26
NME1NME1 SHS1Q07657 551 aa7.17□□□□□ -1.26
NME1NME1 GRR1P24814 1151 aa7.16□□□□□ -1.26
NME1NME1 VAM7P32912 316 aa7.16□□□□□ -1.26
NME1NME1 TDA1Q03533 586 aa7.16□□□□□ -1.26
NME1NME1 IRC25Q07951 179 aa7.16□□□□□ -1.26
NME1NME1 PCL9Q12477 304 aa7.16□□□□□ -1.26
NME1NME1 MSI1P13712 422 aa7.15□□□□□ -1.26
NME1NME1 HXT2P23585 541 aa7.15□□□□□ -1.26
NME1NME1 YHR122WP38829 231 aa7.15□□□□□ -1.26
NME1NME1 RIF2Q06208 395 aa7.15□□□□□ -1.26
NME1NME1 RTC5Q12108 567 aaKnown RBP7.15□□□□□ -1.26
NME1NME1 SSE1P32589 693 aaKnown RBP7.14□□□□□ -1.27
NME1NME1 SUR1P33300 382 aa7.14□□□□□ -1.27
NME1NME1 ECM8P38246 354 aa7.14□□□□□ -1.27
NME1NME1 YNL146WP53906 100 aa7.14□□□□□ -1.27
NME1NME1 SMP3Q04174 516 aa7.14□□□□□ -1.27
NME1NME1 CSE2P33308 149 aa7.13□□□□□ -1.27
NME1NME1 ALP1P38971 573 aa7.13□□□□□ -1.27
NME1NME1 MST27P53176 234 aa7.13□□□□□ -1.27
NME1NME1 RPS16AP0CX51 143 aaKnown RBP7.12□□□□□ -1.27
NME1NME1 RPS16BP0CX52 143 aaKnown RBP7.12□□□□□ -1.27
NME1NME1 CKI1P20485 582 aa7.12□□□□□ -1.27
NME1NME1 LIN1P38852 340 aaPredicted RBP7.12□□□□□ -1.27
NME1NME1 YHC3P47040 408 aa7.12□□□□□ -1.27
NME1NME1 YGL114WP53134 725 aa7.12□□□□□ -1.27
NME1NME1 PRO2P54885 456 aaKnown RBP7.12□□□□□ -1.27
NME1NME1 YPR091CQ06833 770 aa7.12□□□□□ -1.27
NME1NME1 YDL114WQ07530 308 aa7.12□□□□□ -1.27
NME1NME1 GAT3Q07928 141 aa7.12□□□□□ -1.27
NME1NME1 FDH1Q08911 376 aa7.12□□□□□ -1.27
NME1NME1 JID1Q12350 301 aa7.12□□□□□ -1.27
NME1NME1 RPB5P20434 215 aa7.11□□□□□ -1.27
NME1NME1 TOA1P32773 286 aa7.11□□□□□ -1.27
NME1NME1 YFR057WP43625 151 aa7.11□□□□□ -1.27
NME1NME1 YMR010WQ03687 405 aa7.11□□□□□ -1.27
NME1NME1 FCY22Q12119 530 aa7.11□□□□□ -1.27
NME1NME1 RNR2P09938 399 aaKnown RBP7.1□□□□□ -1.27
NME1NME1 YLL053CP0CD98 152 aa7.1□□□□□ -1.27
NME1NME1 YHR182WP38870 785 aa7.1□□□□□ -1.27
NME1NME1 PRP39P39682 629 aaKnown RBP7.1□□□□□ -1.27
NME1NME1 PES4P39684 611 aa7.1□□□□□ -1.27
NME1NME1 OSW5P40219 148 aa7.1□□□□□ -1.27
NME1NME1 CLD1P53264 445 aa7.1□□□□□ -1.27
NME1NME1 IZH2Q12442 317 aa7.1□□□□□ -1.27
NME1NME1 CMS1Q07897 291 aaKnown RBP7.09□□□□□ -1.27
NME1NME1 SPO23P33757 523 aa7.08□□□□□ -1.28
NME1NME1 YDR089WP38966 869 aa7.08□□□□□ -1.28
NME1NME1 YOL075CQ08234 1294 aa7.08□□□□□ -1.28
NME1NME1 APC5Q08683 685 aa7.08□□□□□ -1.28
NME1NME1 RGS2Q99188 309 aa7.08□□□□□ -1.28
NME1NME1 RPS0AP32905 252 aaKnown RBP7.07□□□□□ -1.28
NME1NME1 BIR1P47134 954 aa7.07□□□□□ -1.28
NME1NME1 RRG7Q08774 242 aaPredicted RBP7.07□□□□□ -1.28
NME1NME1 MDY2Q12285 212 aa7.07□□□□□ -1.28
NME1NME1 SPO24Q3E752 67 aa7.07□□□□□ -1.28
NME1NME1 FUN26P31381 517 aa7.06□□□□□ -1.28
NME1NME1 YMR134WP40207 237 aa7.06□□□□□ -1.28
NME1NME1 NAT4Q04751 285 aa7.06□□□□□ -1.28
NME1NME1 YLH47Q06493 454 aa7.06□□□□□ -1.28
NME1NME1 CDC37P06101 506 aaKnown RBP7.05□□□□□ -1.28
NME1NME1 GAL3P13045 520 aa7.05□□□□□ -1.28
NME1NME1 FAR1P21268 830 aa7.05□□□□□ -1.28
NME1NME1 MXR2P25566 168 aa7.05□□□□□ -1.28
NME1NME1 MRPS5P33759 307 aa7.05□□□□□ -1.28
NME1NME1 TRF5P48561 642 aaKnown RBP7.05□□□□□ -1.28
NME1NME1 LST7P53237 242 aa7.05□□□□□ -1.28
NME1NME1 DET1Q99288 334 aaKnown RBP7.05□□□□□ -1.28
NME1NME1 ADH2P00331 348 aaKnown RBP7.04□□□□□ -1.28
NME1NME1 ARF2P19146 181 aaKnown RBP7.04□□□□□ -1.28
NME1NME1 RPL16AP26784 199 aaKnown RBP7.04□□□□□ -1.28
NME1NME1 PRR1P28708 518 aa7.04□□□□□ -1.28
NME1NME1 ZUO1P32527 433 aaKnown RBP7.04□□□□□ -1.28
NME1NME1 MRPL10P36520 322 aa7.04□□□□□ -1.28
NME1NME1 RBG1P39729 369 aa7.04□□□□□ -1.28
NME1NME1 SSO2P39926 295 aa7.04□□□□□ -1.28
NME1NME1 YNL208WP40159 199 aaKnown RBP7.04□□□□□ -1.28
NME1NME1 EGT2P42835 1041 aa7.04□□□□□ -1.28
NME1NME1 VPS20Q04272 221 aa7.04□□□□□ -1.28
NME1NME1 SCW10Q04951 389 aa7.04□□□□□ -1.28
NME1NME1 RSA1Q08932 381 aa7.04□□□□□ -1.28
NME1NME1 YDL199CQ12407 687 aa7.04□□□□□ -1.28
NME1NME1 KEG1P43614 200 aa7.03□□□□□ -1.28
NME1NME1 AIP1P46680 615 aaKnown RBP7.03□□□□□ -1.28
NME1NME1 YJR030CP47101 745 aa7.03□□□□□ -1.28
NME1NME1 REX2P54964 269 aaKnown RBP7.03□□□□□ -1.28
NME1NME1 PLP2Q12017 286 aa7.03□□□□□ -1.28
NME1NME1 HRT3Q12347 344 aa7.03□□□□□ -1.28
NME1NME1 RVS161P25343 265 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms