RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 LRCH3Q96II8 777 aa9.28□□□□□ -0.92
NEK3-209ENST00000618856 TTC12Q9H892 705 aaPredicted RBP9.28□□□□□ -0.92
NEK3-209ENST00000618856 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
NEK3-209ENST00000618856 PCDHA12Q9UN75 941 aa9.28□□□□□ -0.92
NEK3-209ENST00000618856 SAMM50Q9Y512 469 aa9.28□□□□□ -0.92
NEK3-209ENST00000618856 PPME1Q9Y570 386 aa9.28□□□□□ -0.92
NEK3-209ENST00000618856 MYH9P35579 1960 aaKnown RBP9.28□□□□□ -0.92
NEK3-209ENST00000618856 KAT6AQ92794 2004 aa9.27□□□□□ -0.92
NEK3-209ENST00000618856 TMEM265A0A087WTH1 108 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.27□□□□□ -0.93
NEK3-209ENST00000618856 ABHD14A-ACY1A0A1B0GW23 586 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.27□□□□□ -0.93
NEK3-209ENST00000618856 LAD1O00515 517 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 DKC1O60832 514 aaKnown RBP eCLIP9.27□□□□□ -0.93
NEK3-209ENST00000618856 EFCAB14O75071 495 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 MAFO75444 373 aaPredicted RBP9.27□□□□□ -0.93
NEK3-209ENST00000618856 SPATA31C1P0DKV0 1188 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 MCM7P33993 719 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 FXR2P51116 673 aaKnown RBP eCLIP9.27□□□□□ -0.93
NEK3-209ENST00000618856 IGBP1P78318 339 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 MRPS6P82932 125 aaKnown RBP9.27□□□□□ -0.93
NEK3-209ENST00000618856 PDIA5Q14554 519 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 LPIN1Q14693 890 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 RILPL1Q5EBL4 403 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 FBXO47Q5MNV8 452 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 IER5Q5VY09 327 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 LARP1BQ659C4 914 aaKnown RBP9.27□□□□□ -0.93
NEK3-209ENST00000618856 OTOP2Q7RTS6 562 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 DEFB128Q7Z7B8 93 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 RSPH3Q86UC2 560 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 ZNF710Q8N1W2 664 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 IGSF22Q8N9C0 903 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 USP38Q8NB14 1042 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 NEK9Q8TD19 979 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 PCDHB6Q9Y5E3 794 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 PTPRSQ13332 1948 aa9.27□□□□□ -0.93
NEK3-209ENST00000618856 COL4A6Q14031 1691 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 GPR32O75388 356 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 SLC34A2O95436 690 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 OR52Z1P0C646 297 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 ACTN1P12814 892 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 XRCC6P12956 609 aaKnown RBP eCLIP9.26□□□□□ -0.93
NEK3-209ENST00000618856 PDCP20941 246 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 SYT1P21579 422 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 PRPHP41219 470 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 TXKP42681 527 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 WDR5P61964 334 aaKnown RBP9.26□□□□□ -0.93
NEK3-209ENST00000618856 NBR1Q14596 966 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 ZNF174Q15697 407 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 IL17AQ16552 155 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 TSHZ1Q6ZSZ6 1077 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 CKAP2LQ8IYA6 745 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 CRIPAKQ8N1N5 446 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 BANK1Q8NDB2 785 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 DBF4BQ8NFT6 615 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 APBB2Q92870 758 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 DYDC2Q96IM9 177 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 SLC9A7Q96T83 725 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 EIF2AK1Q9BQI3 630 aaKnown RBP9.26□□□□□ -0.93
NEK3-209ENST00000618856 LXNQ9BS40 222 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 POLR3CQ9BUI4 534 aaPredicted RBP9.26□□□□□ -0.93
NEK3-209ENST00000618856 PBX4Q9BYU1 374 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 CELF4Q9BZC1 486 aaKnown RBP9.26□□□□□ -0.93
NEK3-209ENST00000618856 MTIF3Q9H2K0 278 aaKnown RBP9.26□□□□□ -0.93
NEK3-209ENST00000618856 ADAMTS10Q9H324 1103 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 DHX33Q9H6R0 707 aaKnown RBP9.26□□□□□ -0.93
NEK3-209ENST00000618856 ZSWIM4Q9H7M6 989 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 AGO3Q9H9G7 860 aaKnown RBP9.26□□□□□ -0.93
NEK3-209ENST00000618856 RGL1Q9NZL6 768 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 NOL7Q9UMY1 257 aaKnown RBP9.26□□□□□ -0.93
NEK3-209ENST00000618856 TRPV2Q9Y5S1 764 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 CDY2AQ9Y6F7 541 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 SLC4A7Q9Y6M7 1214 aa9.26□□□□□ -0.93
NEK3-209ENST00000618856 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.25□□□□□ -0.93
NEK3-209ENST00000618856 TMEM150BA6NC51 233 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 POTEMA6NI47 508 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 H3BQV1 296 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 RBAK-RBAKDNI3L0D1 243 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 CTSHP09668 335 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 MUTP22033 750 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 YWHABP31946 246 aaKnown RBP9.25□□□□□ -0.93
NEK3-209ENST00000618856 CRYBB1P53674 252 aaPredicted RBP9.25□□□□□ -0.93
NEK3-209ENST00000618856 ATP2C1P98194 919 aaPredicted RBP9.25□□□□□ -0.93
NEK3-209ENST00000618856 PTGDRQ13258 359 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 IKBKEQ14164 716 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 NCAPH2Q6IBW4 605 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 BRAPQ7Z569 592 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 CATSPER3Q86XQ3 398 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 ZNF579Q8NAF0 562 aaKnown RBP9.25□□□□□ -0.93
NEK3-209ENST00000618856 TMEM40Q8WWA1 233 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 SEPT8Q92599 483 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 IFIH1Q9BYX4 1025 aaKnown RBP9.25□□□□□ -0.93
NEK3-209ENST00000618856 FTOQ9C0B1 505 aaKnown RBP eCLIP9.25□□□□□ -0.93
NEK3-209ENST00000618856 FAM49AQ9H0Q0 323 aaPredicted RBP9.25□□□□□ -0.93
NEK3-209ENST00000618856 TTYH1Q9H313 450 aaPredicted RBP9.25□□□□□ -0.93
NEK3-209ENST00000618856 CDHR5Q9HBB8 845 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 TUFT1Q9NNX1 390 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 CYP26B1Q9NR63 512 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 ANKEF1Q9NU02 776 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 MTMR6Q9Y217 621 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms