RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 TECP42680 631 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 ANTXR2P58335 489 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 ACTR2P61160 394 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 TMEM266Q2M3C6 531 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 RALYLQ86SE5 291 aaKnown RBP17.14■□□□□ 0.33
SSBP4-214ENST00000607020 TEX2Q8IWB9 1127 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 KIAA0319LQ8IZA0 1049 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 CTCFLQ8NI51 663 aaPredicted RBP17.14■□□□□ 0.33
SSBP4-214ENST00000607020 EXOC6Q8TAG9 804 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 TRAPPC12Q8WVT3 735 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 ADAM2Q99965 735 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 KCNH7Q9NS40 1196 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 TMEM161AQ9NX61 479 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 PCDHA6Q9UN73 950 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 NOC2LQ9Y3T9 749 aaKnown RBP17.14■□□□□ 0.33
SSBP4-214ENST00000607020 NR2E1Q9Y466 385 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 PCDHA8Q9Y5H6 950 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 RIF1Q5UIP0 2472 aaKnown RBP17.14■□□□□ 0.33
SSBP4-214ENST00000607020 IGKV6D-21A0A0A0MT36 114 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 GPR182O15218 404 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 RPS6KA5O75582 802 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 PDGFBP01127 241 aaPredicted RBP17.13■□□□□ 0.33
SSBP4-214ENST00000607020 KLRC1P26715 233 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 ASCL5Q7RTU5 278 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 ZNF654Q8IZM8 581 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 SRBD1Q8N5C6 995 aaKnown RBP17.13■□□□□ 0.33
SSBP4-214ENST00000607020 KREMEN2Q8NCW0 462 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 NECTIN4Q96NY8 510 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 MXRA8Q9BRK3 442 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 CDHR5Q9HBB8 845 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 PKD2L1Q9P0L9 805 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 ST3GAL5Q9UNP4 418 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 SORCS3Q9UPU3 1222 aa17.13■□□□□ 0.33
SSBP4-214ENST00000607020 MYH6P13533 1939 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 DENND3A2RUS2 1198 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 HBP1O60381 514 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 PTH1RQ03431 593 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 ITIH3Q06033 890 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 MTMR3Q13615 1198 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 TPRNQ4KMQ1 711 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 ZBTB33Q86T24 672 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 MB21D2Q8IYB1 491 aaPredicted RBP17.12■□□□□ 0.33
SSBP4-214ENST00000607020 TMTC2Q8N394 836 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 TMEM40Q8WWA1 233 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 SDF4Q9BRK5 362 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 ADAM7Q9H2U9 754 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 ATP6V0A4Q9HBG4 840 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 LY9Q9HBG7 655 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 TAF6LQ9Y6J9 622 aa17.12■□□□□ 0.33
SSBP4-214ENST00000607020 PRR23AA6NEV1 266 aa17.11■□□□□ 0.33
SSBP4-214ENST00000607020 IGHDP01880 384 aa17.11■□□□□ 0.33
SSBP4-214ENST00000607020 PDE4AP27815 886 aa17.11■□□□□ 0.33
SSBP4-214ENST00000607020 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
SSBP4-214ENST00000607020 DSC3Q14574 896 aa17.11■□□□□ 0.33
SSBP4-214ENST00000607020 CASP10Q92851 521 aa17.11■□□□□ 0.33
SSBP4-214ENST00000607020 TCF25Q9BQ70 676 aa17.11■□□□□ 0.33
SSBP4-214ENST00000607020 TMEM117Q9H0C3 514 aa17.11■□□□□ 0.33
SSBP4-214ENST00000607020 HCSTQ9UBK5 93 aa17.11■□□□□ 0.33
SSBP4-214ENST00000607020 BAZ2BQ9UIF8 2168 aaKnown RBP17.11■□□□□ 0.33
SSBP4-214ENST00000607020 HIDE1A8MVS5 230 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 HOXA2O43364 376 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 BRD1O95696 1058 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 PPM1AP35813 382 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 CRYBB1P53674 252 aaPredicted RBP17.1■□□□□ 0.33
SSBP4-214ENST00000607020 KRT17Q04695 432 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 APOBRQ0VD83 1088 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 UBE2SQ16763 222 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 ZNF484Q5JVG2 852 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 PLPP4Q5VZY2 271 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 KCNT2Q6UVM3 1135 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 ERMP1Q7Z2K6 904 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 TMEM105Q8N8V8 129 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 MRPL43Q8N983 215 aaKnown RBP17.1■□□□□ 0.33
SSBP4-214ENST00000607020 CYP2W1Q8TAV3 490 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 RUFY2Q8WXA3 655 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 CASD1Q96PB1 797 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 SPTBN4Q9H254 2564 aa17.1■□□□□ 0.33
SSBP4-214ENST00000607020 MEIS1O00470 390 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 PLEKHA8P1O95397 391 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 FGFR1P11362 822 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 CLCN5P51795 746 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 ITGB3BPQ13352 177 aaPredicted RBP17.09■□□□□ 0.33
SSBP4-214ENST00000607020 CEP55Q53EZ4 464 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 ASTLQ6HA08 431 aaPredicted RBP17.09■□□□□ 0.33
SSBP4-214ENST00000607020 CES5AQ6NT32 575 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 ABHD15Q6UXT9 468 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 LRRC55Q6ZSA7 311 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 ZDHHC14Q8IZN3 488 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 AGO4Q9HCK5 861 aaKnown RBP17.09■□□□□ 0.33
SSBP4-214ENST00000607020 ENTPD7Q9NQZ7 604 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 GINS2Q9Y248 185 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 COL1A2P08123 1366 aa17.09■□□□□ 0.33
SSBP4-214ENST00000607020 C2CD4DB7Z1M9 353 aa17.08■□□□□ 0.32
SSBP4-214ENST00000607020 FOSP01100 380 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-214ENST00000607020 CALM1P0DP23 149 aa17.08■□□□□ 0.32
SSBP4-214ENST00000607020 CALM2P0DP24 149 aa17.08■□□□□ 0.32
SSBP4-214ENST00000607020 CALM3P0DP25 149 aa17.08■□□□□ 0.32
SSBP4-214ENST00000607020 ARP10275 920 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms