RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 ATP9AO75110 1047 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 TDP2O95551 362 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 RB1P06400 928 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 SMIM10L2AP0DMW4 78 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 SMIM10L2BP0DMW5 78 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 ARP10275 920 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 TGFB3P10600 412 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 KCNA2P16389 499 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
TOMM40-204ENST00000589253 HSDL1Q3SXM5 330 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 LARP1BQ659C4 914 aaKnown RBP13.19□□□□□ -0.3
TOMM40-204ENST00000589253 MCTP2Q6DN12 878 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 SPRYD3Q8NCJ5 442 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 PPP2R3CQ969Q6 453 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 MBOAT7Q96N66 472 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 FOXP1Q9H334 677 aaPredicted RBP13.19□□□□□ -0.3
TOMM40-204ENST00000589253 BRMS1Q9HCU9 246 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 NLRC5Q86WI3 1866 aa13.19□□□□□ -0.3
TOMM40-204ENST00000589253 FIBPO43427 364 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 SLC37A4O43826 429 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 SYT1P21579 422 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 U2AF2P26368 475 aaKnown RBP eCLIP13.18□□□□□ -0.3
TOMM40-204ENST00000589253 IRS1P35568 1242 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 USP11P51784 963 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 ITGB3BPQ13352 177 aaPredicted RBP13.18□□□□□ -0.3
TOMM40-204ENST00000589253 COL19A1Q14993 1142 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 SMAD2Q15796 467 aaKnown RBP13.18□□□□□ -0.3
TOMM40-204ENST00000589253 CLUL1Q15846 466 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 GNPTABQ3T906 1256 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 NIPA1Q7RTP0 329 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 PRRX2Q99811 253 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 C16orf70Q9BSU1 422 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 KCNH7Q9NS40 1196 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 MUTYHQ9UIF7 546 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 ZNF215Q9UL58 517 aaPredicted RBP13.18□□□□□ -0.3
TOMM40-204ENST00000589253 KIF3AQ9Y496 699 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 ARID2Q68CP9 1835 aa13.18□□□□□ -0.3
TOMM40-204ENST00000589253 LOXHD1Q8IVV2 1947 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 CYP3A7-CYP3A51PA0A087WV96 503 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 TREHO43280 583 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 LGALS2P05162 132 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 CYP3A7P24462 503 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 SMAD4Q13485 552 aaKnown RBP13.17□□□□□ -0.3
TOMM40-204ENST00000589253 MTMR1Q13613 665 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 PKP1Q13835 747 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 HIC1Q14526 733 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 SAFBQ15424 915 aaKnown RBP eCLIP13.17□□□□□ -0.3
TOMM40-204ENST00000589253 LETM2Q2VYF4 491 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 HERC4Q5GLZ8 1057 aaPredicted RBP13.17□□□□□ -0.3
TOMM40-204ENST00000589253 MOXD1Q6UVY6 613 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 NEK8Q86SG6 692 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 PLA2G4DQ86XP0 818 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 NOSTRINQ8IVI9 506 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 GJA10Q969M2 543 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 IGFLR1Q9H665 355 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 AGO4Q9HCK5 861 aaKnown RBP13.17□□□□□ -0.3
TOMM40-204ENST00000589253 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 PKD2L1Q9P0L9 805 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 MTMR6Q9Y217 621 aa13.17□□□□□ -0.3
TOMM40-204ENST00000589253 ADGRA3Q8IWK6 1321 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.16□□□□□ -0.3
TOMM40-204ENST00000589253 VPS37CA5D8V6 355 aaPredicted RBP13.16□□□□□ -0.3
TOMM40-204ENST00000589253 C5orf67F2Z3F1 127 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 H3BQV1 296 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 MBTPS2O43462 519 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 CSPG5O95196 566 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 ZNF76P36508 570 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 BMPR1AP36894 532 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 NDUFV1P49821 464 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 TOB1P50616 345 aaPredicted RBP13.16□□□□□ -0.3
TOMM40-204ENST00000589253 PTPN5P54829 565 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 NEDD9Q14511 834 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 NBR1Q14596 966 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 Q4G0T1 1027 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 PRR16Q569H4 304 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 NLRX1Q86UT6 975 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 RNF135Q8IUD6 432 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 SUGP1Q8IWZ8 645 aaKnown RBP13.16□□□□□ -0.3
TOMM40-204ENST00000589253 ETNPPLQ8TBG4 499 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 RNPEPQ9H4A4 650 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 CD207Q9UJ71 328 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 WDFY4Q6ZS81 3184 aa13.16□□□□□ -0.3
TOMM40-204ENST00000589253 MSH4O15457 936 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 DHX15O43143 795 aaKnown RBP13.15□□□□□ -0.3
TOMM40-204ENST00000589253 HOXC8P31273 242 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 SETQ01105 290 aaPredicted RBP13.15□□□□□ -0.3
TOMM40-204ENST00000589253 HYAL1Q12794 435 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 RESTQ13127 1097 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 BTG3Q14201 252 aaPredicted RBP13.15□□□□□ -0.3
TOMM40-204ENST00000589253 CTC1Q2NKJ3 1217 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 PPP4R3AQ6IN85 833 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 METTL7BQ6UX53 244 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 CYFIP1Q7L576 1253 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 RSPH3Q86UC2 560 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 POTEDQ86YR6 584 aa13.15□□□□□ -0.3
TOMM40-204ENST00000589253 SNX27Q96L92 541 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms