RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 M0R2N6 131 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 PPFIA4O75335 1185 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 ITGB5P18084 799 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 SP4Q02446 784 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 DLX2Q07687 328 aaPredicted RBP15.06■□□□□ 0
CCDC40-205ENST00000571028 BECN1Q14457 450 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 LETM2Q2VYF4 491 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 XRRA1Q6P2D8 792 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 PLA2G4DQ86XP0 818 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 TEX2Q8IWB9 1127 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 FBXL6Q8N531 539 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 INTS4Q96HW7 963 aaKnown RBP15.06■□□□□ 0
CCDC40-205ENST00000571028 MXRA8Q9BRK3 442 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 UBIAD1Q9Y5Z9 338 aa15.06■□□□□ 0
CCDC40-205ENST00000571028 RBAK-RBAKDNI3L0D1 243 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 CAND2O75155 1236 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 TBX10O75333 385 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 STAM2O75886 525 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 BMPR1AP36894 532 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 TCF15Q12870 199 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 MTMR1Q13613 665 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 PRR16Q569H4 304 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 KCNV1Q6PIU1 500 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 ATOH1Q92858 354 aaPredicted RBP15.05■□□□□ -0
CCDC40-205ENST00000571028 INPP4AQ96PE3 977 aaPredicted RBP15.05■□□□□ -0
CCDC40-205ENST00000571028 JADE2Q9NQC1 790 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 FAM86C1Q9NVL1 165 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 COL4A6Q14031 1691 aa15.05■□□□□ -0
CCDC40-205ENST00000571028 FAM86B1E9PN63 330 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 C5orf67F2Z3F1 127 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 GRM6O15303 877 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 FIBPO43427 364 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 TDP2O95551 362 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 GGPS1O95749 300 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 CYP3A4P08684 503 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 FAM86B2P0C5J1 330 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 ARP10275 920 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 GNAT1P11488 350 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 ZXDAP98168 799 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 SP2Q02086 613 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 SEMA3FQ13275 785 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 CEP55Q53EZ4 464 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 FOXD4L5Q5VV16 416 aaPredicted RBP15.04■□□□□ -0
CCDC40-205ENST00000571028 NEK8Q86SG6 692 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 FOXD4L4Q8WXT5 416 aaPredicted RBP15.04■□□□□ -0
CCDC40-205ENST00000571028 GPRASP2Q96D09 838 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 BCAS3Q9H6U6 928 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 MLXIPQ9HAP2 919 aa15.04■□□□□ -0
CCDC40-205ENST00000571028 ZNF318Q5VUA4 2279 aa15.03■□□□□ -0
CCDC40-205ENST00000571028 ADGRA3Q8IWK6 1321 aa15.03■□□□□ -0
CCDC40-205ENST00000571028 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.03■□□□□ -0
CCDC40-205ENST00000571028 SPATA31C2B4DYI2 1134 aa15.03■□□□□ -0
CCDC40-205ENST00000571028 DDX39AO00148 427 aaKnown RBP15.03■□□□□ -0
CCDC40-205ENST00000571028 CCNT1O60563 726 aaKnown RBP15.03■□□□□ -0
CCDC40-205ENST00000571028 SMIM10L2AP0DMW4 78 aa15.03■□□□□ -0
CCDC40-205ENST00000571028 SMIM10L2BP0DMW5 78 aa15.03■□□□□ -0
CCDC40-205ENST00000571028 UBA1P22314 1058 aaKnown RBP15.03■□□□□ -0
CCDC40-205ENST00000571028 HIC1Q14526 733 aa15.03■□□□□ -0
CCDC40-205ENST00000571028 HSDL1Q3SXM5 330 aa15.03■□□□□ -0
CCDC40-205ENST00000571028 CELF3Q5SZQ8 465 aaKnown RBP15.03■□□□□ -0
CCDC40-205ENST00000571028 MYSM1Q5VVJ2 828 aa15.03■□□□□ -0
CCDC40-205ENST00000571028 CYFIP1Q7L576 1253 aa15.03■□□□□ -0
CCDC40-205ENST00000571028 TNFRSF25Q93038 417 aa15.03■□□□□ -0
CCDC40-205ENST00000571028 H3BRB1 525 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 MEIS1O00470 390 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 NOP56O00567 594 aaKnown RBP15.02■□□□□ -0
CCDC40-205ENST00000571028 LINC01565O15544 149 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 TREHO43280 583 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 EDIL3O43854 480 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 ATP9AO75110 1047 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 HOXD8P13378 290 aaPredicted RBP15.02■□□□□ -0
CCDC40-205ENST00000571028 PDCP20941 246 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 SYT1P21579 422 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 ICAM3P32942 547 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 GTF2F1P35269 517 aaKnown RBP eCLIP15.02■□□□□ -0
CCDC40-205ENST00000571028 USP11P51784 963 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 BTG3Q14201 252 aaPredicted RBP15.02■□□□□ -0
CCDC40-205ENST00000571028 FERMT3Q86UX7 667 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 CRYGNQ8WXF5 182 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 FOXP1Q9H334 677 aaPredicted RBP15.02■□□□□ -0
CCDC40-205ENST00000571028 TUT1Q9H6E5 874 aaKnown RBP15.02■□□□□ -0
CCDC40-205ENST00000571028 KCNH7Q9NS40 1196 aa15.02■□□□□ -0
CCDC40-205ENST00000571028 DDX25Q9UHL0 483 aaKnown RBP15.02■□□□□ -0
CCDC40-205ENST00000571028 MICAL3Q7RTP6 2002 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 MARCH6O60337 910 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 TGFB3P10600 412 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 SIGLEC14Q08ET2 396 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 ADAM15Q13444 863 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 NEDD9Q14511 834 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 NOSTRINQ8IVI9 506 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 GJA10Q969M2 543 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 CDHR1Q96JP9 859 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 SDF4Q9BRK5 362 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 ZNF577Q9BSK1 485 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 C16orf70Q9BSU1 422 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 PLVAPQ9BX97 442 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 AGO4Q9HCK5 861 aaKnown RBP15.01□□□□□ -0.01
CCDC40-205ENST00000571028 USP34Q70CQ2 3546 aa15.01□□□□□ -0.01
CCDC40-205ENST00000571028 IGLV3-22A0A075B6J6 115 aa15□□□□□ -0.01
CCDC40-205ENST00000571028 SLC37A4O43826 429 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms