RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 STK25O00506 426 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 ADRB1P08588 477 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 GLULP15104 373 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 EPCAMP16422 314 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 TCF7P36402 384 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-206ENST00000558739 TDGQ13569 410 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 KIAA0319Q5VV43 1072 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 TMC5Q6UXY8 1006 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 LRRC55Q6ZSA7 311 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 MAML2Q8IZL2 1156 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-206ENST00000558739 PNMA1Q8ND90 353 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 AUTS2Q8WXX7 1259 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 INPP4AQ96PE3 977 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-206ENST00000558739 CYP26B1Q9NR63 512 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 DLGAP2Q9P1A6 1054 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 LZTS1Q9Y250 596 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 USTQ9Y2C2 406 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 PCDHB7Q9Y5E2 793 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 TRPV2Q9Y5S1 764 aa13.77□□□□□ -0.21
SMAD3-206ENST00000558739 N4BP1O75113 896 aaKnown RBP13.76□□□□□ -0.21
SMAD3-206ENST00000558739 LRRN2O75325 713 aa13.76□□□□□ -0.21
SMAD3-206ENST00000558739 FGAP02671 866 aa13.76□□□□□ -0.21
SMAD3-206ENST00000558739 PLCB3Q01970 1234 aa13.76□□□□□ -0.21
SMAD3-206ENST00000558739 NEDD9Q14511 834 aa13.76□□□□□ -0.21
SMAD3-206ENST00000558739 SLC35G1Q2M3R5 365 aa13.76□□□□□ -0.21
SMAD3-206ENST00000558739 ZC3H14Q6PJT7 736 aaKnown RBP13.76□□□□□ -0.21
SMAD3-206ENST00000558739 TMC7Q7Z402 723 aa13.76□□□□□ -0.21
SMAD3-206ENST00000558739 MIER1Q8N108 512 aa13.76□□□□□ -0.21
SMAD3-206ENST00000558739 STAG2Q8N3U4 1231 aa13.76□□□□□ -0.21
SMAD3-206ENST00000558739 PI4K2BQ8TCG2 481 aa13.76□□□□□ -0.21
SMAD3-206ENST00000558739 TMEM40Q8WWA1 233 aa13.76□□□□□ -0.21
SMAD3-206ENST00000558739 NGRNQ9NPE2 291 aaKnown RBP13.76□□□□□ -0.21
SMAD3-206ENST00000558739 PCDHA1Q9Y5I3 950 aa13.76□□□□□ -0.21
SMAD3-206ENST00000558739 MIA3Q5JRA6 1907 aa13.75□□□□□ -0.21
SMAD3-206ENST00000558739 LAG3P18627 525 aa13.75□□□□□ -0.21
SMAD3-206ENST00000558739 CA8P35219 290 aa13.75□□□□□ -0.21
SMAD3-206ENST00000558739 NFX1Q12986 1120 aaKnown RBP13.75□□□□□ -0.21
SMAD3-206ENST00000558739 XRRA1Q6P2D8 792 aa13.75□□□□□ -0.21
SMAD3-206ENST00000558739 MRPL43Q8N983 215 aaKnown RBP13.75□□□□□ -0.21
SMAD3-206ENST00000558739 CHAMP1Q96JM3 812 aa13.75□□□□□ -0.21
SMAD3-206ENST00000558739 TTC14Q96N46 770 aa13.75□□□□□ -0.21
SMAD3-206ENST00000558739 ADAM2Q99965 735 aa13.75□□□□□ -0.21
SMAD3-206ENST00000558739 RNF19AQ9NV58 838 aa13.75□□□□□ -0.21
SMAD3-206ENST00000558739 CDV3Q9UKY7 258 aaKnown RBP13.75□□□□□ -0.21
SMAD3-206ENST00000558739 PATJQ8NI35 1801 aa13.75□□□□□ -0.21
SMAD3-206ENST00000558739 FRMPD4Q14CM0 1322 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 C9IYK1 514 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 COL9A3Q14050 684 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-206ENST00000558739 GNPTABQ3T906 1256 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 ATAT1Q5SQI0 421 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 KCNT2Q6UVM3 1135 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 C1orf210Q8IVY1 113 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 GPATCH3Q96I76 525 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 AMNQ9BXJ7 453 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 FOXQ1Q9C009 403 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 CDHR5Q9HBB8 845 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-206ENST00000558739 NCDNQ9UBB6 729 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 GINS2Q9Y248 185 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 EVPLQ92817 2033 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 LAMA4Q16363 1823 aa13.74□□□□□ -0.21
SMAD3-206ENST00000558739 IGSF10Q6WRI0 2623 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 GSTTP1A0A1W2PQM5 241 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 FIBPO43427 364 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 ATP9AO75110 1047 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 INSRRP14616 1297 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 RFX1P22670 979 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 TGM1P22735 817 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 TBC1D8BQ0IIM8 1120 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 SMC1AQ14683 1233 aaKnown RBP13.73□□□□□ -0.21
SMAD3-206ENST00000558739 ALX1Q15699 326 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 ASPRV1Q53RT3 343 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 VARS2Q5ST30 1063 aaKnown RBP13.73□□□□□ -0.21
SMAD3-206ENST00000558739 IER5Q5VY09 327 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 ZNF589Q86UQ0 364 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-206ENST00000558739 ST13P5Q8NFI4 369 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-206ENST00000558739 PPP1R16BQ96T49 567 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 PCYT2Q99447 389 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 CELF4Q9BZC1 486 aaKnown RBP13.73□□□□□ -0.21
SMAD3-206ENST00000558739 PARD6AQ9NPB6 346 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 PKD2L1Q9P0L9 805 aa13.73□□□□□ -0.21
SMAD3-206ENST00000558739 PUF60Q9UHX1 559 aaKnown RBP13.73□□□□□ -0.21
SMAD3-206ENST00000558739 NOC2LQ9Y3T9 749 aaKnown RBP13.73□□□□□ -0.21
SMAD3-206ENST00000558739 A0A0D9SFI3 127 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 DENND3A2RUS2 1198 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 TRIM6-TRIM34B2RNG4 842 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 GCOM1H8Y6P7 765 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-206ENST00000558739 PARP1P09874 1014 aaKnown RBP13.72□□□□□ -0.21
SMAD3-206ENST00000558739 POLR2MP0CAP2 368 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 ACAP1Q15027 740 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 PPM1JQ5JR12 505 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 CCDC149Q6ZUS6 474 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 TMEM173Q86WV6 379 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-206ENST00000558739 HOMER1Q86YM7 354 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 FAM227BQ96M60 508 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 ZNF558Q96NG5 402 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 CASD1Q96PB1 797 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 RGS18Q9NS28 235 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 ERAP1Q9NZ08 941 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms