RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 FRS2Q8WU20 508 aa6.53□□□□□ -1.36
SCAF11-214ENST00000550893 MMP19Q99542 508 aa6.53□□□□□ -1.36
SCAF11-214ENST00000550893 ST7Q9NRC1 585 aa6.53□□□□□ -1.36
SCAF11-214ENST00000550893 LRP2BPQ9P2M1 347 aa6.53□□□□□ -1.36
SCAF11-214ENST00000550893 TIAM2Q8IVF5 1701 aa6.53□□□□□ -1.36
SCAF11-214ENST00000550893 ADAMTS20P59510 1910 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 FER1L6Q2WGJ9 1857 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 ERVV-2B6SEH9 535 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 KCNQ3O43525 872 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 NPHS1O60500 1241 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 BUB1BO60566 1050 aaPredicted RBP6.52□□□□□ -1.37
SCAF11-214ENST00000550893 DIAPH1O60610 1272 aaKnown RBP6.52□□□□□ -1.37
SCAF11-214ENST00000550893 CELF2-AS1Q8N7Q2 184 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 NPLOC4Q8TAT6 608 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 PLEKHF1Q96S99 279 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 SYT17Q9BSW7 474 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 KRTAP4-11Q9BYQ6 195 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 SLC52A2Q9HAB3 445 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 DBR1Q9UK59 544 aaKnown RBP6.52□□□□□ -1.37
SCAF11-214ENST00000550893 R3HCC1Q9Y3T6 440 aaKnown RBP6.52□□□□□ -1.37
SCAF11-214ENST00000550893 ADCY9O60503 1353 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 CARMIL3Q8ND23 1372 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 HEG1Q9ULI3 1381 aa6.52□□□□□ -1.37
SCAF11-214ENST00000550893 DICER1Q9UPY3 1922 aaKnown RBP6.51□□□□□ -1.37
SCAF11-214ENST00000550893 FUCA1P04066 466 aa6.51□□□□□ -1.37
SCAF11-214ENST00000550893 SLC39A6Q13433 755 aa6.51□□□□□ -1.37
SCAF11-214ENST00000550893 SF1Q15637 639 aaKnown RBP6.51□□□□□ -1.37
SCAF11-214ENST00000550893 INF2Q27J81 1249 aa6.51□□□□□ -1.37
SCAF11-214ENST00000550893 TCERG1LQ5VWI1 586 aa6.51□□□□□ -1.37
SCAF11-214ENST00000550893 EEPD1Q7L9B9 569 aa6.51□□□□□ -1.37
SCAF11-214ENST00000550893 CABP7Q86V35 215 aa6.51□□□□□ -1.37
SCAF11-214ENST00000550893 USP33Q8TEY7 942 aa6.51□□□□□ -1.37
SCAF11-214ENST00000550893 DPF3Q92784 378 aa6.51□□□□□ -1.37
SCAF11-214ENST00000550893 DACT3Q96B18 629 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-214ENST00000550893 TMOD3Q9NYL9 352 aa6.51□□□□□ -1.37
SCAF11-214ENST00000550893 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.51□□□□□ -1.37
SCAF11-214ENST00000550893 SOS1Q07889 1333 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-214ENST00000550893 DDX60Q8IY21 1712 aaKnown RBP6.5□□□□□ -1.37
SCAF11-214ENST00000550893 PRAMEF22A3QJZ6 481 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 ARNTLO00327 626 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 KLF4O43474 513 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 SNRPB2P08579 225 aaKnown RBP6.5□□□□□ -1.37
SCAF11-214ENST00000550893 IGFBP6P24592 240 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-214ENST00000550893 HOXC12P31275 282 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 PRKAR2BP31323 418 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 ECI1P42126 302 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 DDR1Q08345 913 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 AMOTQ4VCS5 1084 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 PLEKHO1Q53GL0 409 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-214ENST00000550893 CNKSR3Q6P9H4 555 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 FAM129CQ86XR2 697 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 DNAJC10Q8IXB1 793 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 TMEFF2Q9UIK5 374 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-214ENST00000550893 ZNF646O15015 1829 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-214ENST00000550893 SLX4Q8IY92 1834 aa6.5□□□□□ -1.37
SCAF11-214ENST00000550893 SCG5P05408 212 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 CYP19A1P11511 503 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-214ENST00000550893 GYS1P13807 737 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 PFKLP17858 780 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 CRKLP46109 303 aaKnown RBP6.49□□□□□ -1.37
SCAF11-214ENST00000550893 AFF3P51826 1226 aaKnown RBP6.49□□□□□ -1.37
SCAF11-214ENST00000550893 DDR2Q16832 855 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 PRSS53Q2L4Q9 553 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 SLC10A6Q3KNW5 377 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 CCDC184Q52MB2 194 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 NAALADL2Q58DX5 795 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 WWC2Q6AWC2 1192 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 CCDC103Q8IW40 242 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 TMEM151BQ8IW70 566 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 NETO2Q8NC67 525 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 KREMEN2Q8NCW0 462 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 PLEKHO2Q8TD55 490 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 BCAS3Q9H6U6 928 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 MARCH2Q9P0N8 246 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 SRP68Q9UHB9 627 aaKnown RBP6.49□□□□□ -1.37
SCAF11-214ENST00000550893 ZBTB1Q9Y2K1 713 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 TAF1P21675 1872 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 SNED1Q8TER0 1413 aa6.49□□□□□ -1.37
SCAF11-214ENST00000550893 USP42Q9H9J4 1324 aaKnown RBP6.49□□□□□ -1.37
SCAF11-214ENST00000550893 LRRC37AA6NMS7 1700 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 LTBP1Q14766 1721 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 COL15A1P39059 1388 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 PCNTO95613 3336 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 NTRK1P04629 796 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 CAPNS1P04632 268 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 ATF2P15336 505 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 GRIA2P42262 883 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 KCNJ6P48051 423 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 LIMS1P48059 325 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 GFRA1P56159 465 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 CNGB1Q14028 1251 aaPredicted RBP6.48□□□□□ -1.37
SCAF11-214ENST00000550893 DCTN1Q14203 1278 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 TARBP2Q15633 366 aaKnown RBP6.48□□□□□ -1.37
SCAF11-214ENST00000550893 LCE4AQ5TA78 99 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 E4F1Q66K89 784 aaPredicted RBP6.48□□□□□ -1.37
SCAF11-214ENST00000550893 IQCEQ6IPM2 695 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 LRP10Q7Z4F1 713 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 TEX2Q8IWB9 1127 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 ALG3Q92685 438 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 TSPAN17Q96FV3 270 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms