RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 SWSAP1Q6NVH7 229 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 PSRC1Q6PGN9 363 aaPredicted RBP9.8□□□□□ -0.84
SP1-203ENST00000548560 POTEBQ6S5H4 581 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 TDHQ8IZJ6 230 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 ATP8B4Q8TF62 1192 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 LMBR1Q8WVP7 490 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 GJA10Q969M2 543 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 SNX21Q969T3 373 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 INTS4Q96HW7 963 aaKnown RBP9.8□□□□□ -0.84
SP1-203ENST00000548560 PCYT2Q99447 389 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 PHOX2BQ99453 314 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 MTIF3Q9H2K0 278 aaKnown RBP9.8□□□□□ -0.84
SP1-203ENST00000548560 UNC45AQ9H3U1 944 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 RNPEPQ9H4A4 650 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 SETD4Q9NVD3 440 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 GABBR1Q9UBS5 961 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 TUBE1Q9UJT0 475 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 GBF1Q92538 1859 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 MICAL3Q7RTP6 2002 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 UMODL1Q5DID0 1318 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 IGSF9BQ9UPX0 1349 aa9.8□□□□□ -0.84
SP1-203ENST00000548560 COL1A2P08123 1366 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 LAMA2P24043 3122 aaKnown RBP9.79□□□□□ -0.84
SP1-203ENST00000548560 IGKV6D-21A0A0A0MT36 114 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 VPS37CA5D8V6 355 aaPredicted RBP9.79□□□□□ -0.84
SP1-203ENST00000548560 SOX1O00570 391 aaPredicted RBP9.79□□□□□ -0.84
SP1-203ENST00000548560 TREHO43280 583 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 DKC1O60832 514 aaKnown RBP eCLIP9.79□□□□□ -0.84
SP1-203ENST00000548560 CAND2O75155 1236 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 PARNO95453 639 aaKnown RBP9.79□□□□□ -0.84
SP1-203ENST00000548560 RPLP2P05387 115 aaKnown RBP9.79□□□□□ -0.84
SP1-203ENST00000548560 PFKMP08237 780 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 CSF2RAP15509 400 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 SELPP16109 830 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 U2AF2P26368 475 aaKnown RBP eCLIP9.79□□□□□ -0.84
SP1-203ENST00000548560 HOXC8P31273 242 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 RFC2P35250 354 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 THPOP40225 353 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 ZNF200P98182 395 aaPredicted RBP9.79□□□□□ -0.84
SP1-203ENST00000548560 PPP2R5CQ13362 524 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 PLCB4Q15147 1175 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 C6orf132Q5T0Z8 1188 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 NCAPH2Q6IBW4 605 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 TAF2Q6P1X5 1199 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 LRRC8DQ7L1W4 858 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 RSPH3Q86UC2 560 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 SERINC5Q86VE9 423 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 RPUSD2Q8IZ73 545 aaKnown RBP9.79□□□□□ -0.84
SP1-203ENST00000548560 SCLYQ96I15 445 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 WNT8AQ9H1J5 351 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 IL23AQ9NPF7 189 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 CEP131Q9UPN4 1083 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 TET1Q8NFU7 2136 aa9.79□□□□□ -0.84
SP1-203ENST00000548560 KIF28PB7ZC32 967 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 M0QZ92 97 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 IQCF3P0C7M6 154 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 CKBP12277 381 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 ACTN1P12814 892 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 INSRRP14616 1297 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 PRKCEQ02156 737 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 RBL2Q08999 1139 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 TMEM266Q2M3C6 531 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 RILPL1Q5EBL4 403 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 ZNF484Q5JVG2 852 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 TRMT1LQ7Z2T5 733 aaKnown RBP9.78□□□□□ -0.84
SP1-203ENST00000548560 DHX38Q92620 1227 aaKnown RBP9.78□□□□□ -0.84
SP1-203ENST00000548560 HAS1Q92839 578 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 RNPC3Q96LT9 517 aaKnown RBP9.78□□□□□ -0.84
SP1-203ENST00000548560 TTC12Q9H892 705 aaPredicted RBP9.78□□□□□ -0.84
SP1-203ENST00000548560 NRBP2Q9NSY0 501 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 PCDHA12Q9UN75 941 aa9.78□□□□□ -0.84
SP1-203ENST00000548560 MAFBQ9Y5Q3 323 aaPredicted RBP9.78□□□□□ -0.84
SP1-203ENST00000548560 EYSQ5T1H1 3165 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 CTSHP09668 335 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 OR52Z1P0C646 297 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 ACRP10323 421 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 TXKP42681 527 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 PSMC5P62195 406 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 ADAM17P78536 824 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 MCM6Q14566 821 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 ZNF174Q15697 407 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 B3GNT9Q6UX72 402 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 BRAPQ7Z569 592 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 DEFB128Q7Z7B8 93 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 BANK1Q8NDB2 785 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 NEK9Q8TD19 979 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 TRAPPC12Q8WVT3 735 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 CCDC43Q96MW1 224 aaKnown RBP9.77□□□□□ -0.85
SP1-203ENST00000548560 CTAGE1Q96RT6 745 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 FTOQ9C0B1 505 aaKnown RBP eCLIP9.77□□□□□ -0.85
SP1-203ENST00000548560 FAM49AQ9H0Q0 323 aaPredicted RBP9.77□□□□□ -0.85
SP1-203ENST00000548560 PLSCR2Q9NRY7 297 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 SEPT9Q9UHD8 586 aaPredicted RBP9.77□□□□□ -0.85
SP1-203ENST00000548560 VAV3Q9UKW4 847 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 ADGRG1Q9Y653 693 aa9.77□□□□□ -0.85
SP1-203ENST00000548560 MBLAC1A4D2B0 266 aaPredicted RBP9.76□□□□□ -0.85
SP1-203ENST00000548560 ZBBXA8MT70 800 aa9.76□□□□□ -0.85
SP1-203ENST00000548560 RSPH10B2B2RC85 870 aa9.76□□□□□ -0.85
SP1-203ENST00000548560 EML1O00423 815 aa9.76□□□□□ -0.85
SP1-203ENST00000548560 LAD1O00515 517 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms