RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 SMCHD1A6NHR9 2005 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 GBF1Q92538 1859 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 DDTLA6NHG4 134 aaPredicted RBP8.32□□□□□ -1.08
CCDC59-203ENST00000548126 SLC15A5A6NIM6 579 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 SEPT4O43236 478 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 PQBP1O60828 265 aaKnown RBP8.32□□□□□ -1.08
CCDC59-203ENST00000548126 IGHA2P01877 340 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 ZNF853P0CG23 659 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 AFMP43652 599 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 ZP2Q05996 745 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 MESP2Q0VG99 397 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 PPIGQ13427 754 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCDC59-203ENST00000548126 ANO1Q5XXA6 986 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 MFSD5Q6N075 450 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 SULF2Q8IWU5 870 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 OSBPL5Q9H0X9 879 aaPredicted RBP8.32□□□□□ -1.08
CCDC59-203ENST00000548126 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCDC59-203ENST00000548126 MTCH2Q9Y6C9 303 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 CACNA1BQ00975 2339 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 BRWD1Q9NSI6 2320 aa8.32□□□□□ -1.08
CCDC59-203ENST00000548126 ZFHX2Q9C0A1 2572 aaPredicted RBP8.32□□□□□ -1.08
CCDC59-203ENST00000548126 DCHS1Q96JQ0 3298 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 DCDC2CA8MYV0 355 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 SLC5A1P13866 664 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 ARHGAP4P98171 946 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 MLANAQ16655 118 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 ZC3H12AQ5D1E8 599 aaKnown RBP8.31□□□□□ -1.08
CCDC59-203ENST00000548126 ZNF365Q70YC5 407 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 ANKRD33Q7Z3H0 272 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 C8orf58Q8NAV2 365 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 NPLOC4Q8TAT6 608 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 WDR66Q8TBY9 1149 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 PAGR1Q9BTK6 254 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 PUS3Q9BZE2 481 aaKnown RBP8.31□□□□□ -1.08
CCDC59-203ENST00000548126 NIF3L1Q9GZT8 377 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 AS3MTQ9HBK9 375 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 TMOD4Q9NZQ9 345 aa8.31□□□□□ -1.08
CCDC59-203ENST00000548126 YBX2Q9Y2T7 364 aaKnown RBP8.31□□□□□ -1.08
CCDC59-203ENST00000548126 MROH5Q6ZUA9 1318 aa8.3□□□□□ -1.08
CCDC59-203ENST00000548126 ARNTP27540 789 aa8.3□□□□□ -1.08
CCDC59-203ENST00000548126 BACE1P56817 501 aa8.3□□□□□ -1.08
CCDC59-203ENST00000548126 CCNA1P78396 465 aa8.3□□□□□ -1.08
CCDC59-203ENST00000548126 RALBP1Q15311 655 aa8.3□□□□□ -1.08
CCDC59-203ENST00000548126 PSRC1Q6PGN9 363 aaPredicted RBP8.3□□□□□ -1.08
CCDC59-203ENST00000548126 PDZD3Q86UT5 571 aa8.3□□□□□ -1.08
CCDC59-203ENST00000548126 LINS1Q8NG48 757 aa8.3□□□□□ -1.08
CCDC59-203ENST00000548126 SAMM50Q9Y512 469 aa8.3□□□□□ -1.08
CCDC59-203ENST00000548126 U3KQE9 123 aa8.3□□□□□ -1.08
CCDC59-203ENST00000548126 ZNF521Q96K83 1311 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 C19orf81C9J6K1 198 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 ACRP10323 421 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 CSF2RAP15509 400 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 CAP2P40123 477 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 CLCN7P51798 805 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 GRB14Q14449 540 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 EPHA10Q5JZY3 1008 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 WDR78Q5VTH9 848 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 OLFML2BQ68BL8 750 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 SND1Q7KZF4 910 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCDC59-203ENST00000548126 G2E3Q7L622 706 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 FAM178BQ8IXR5 827 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 TMEM199Q8N511 208 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 STK31Q9BXU1 1019 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 MTIF3Q9H2K0 278 aaKnown RBP8.29□□□□□ -1.08
CCDC59-203ENST00000548126 PRKRIP1Q9H875 184 aaPredicted RBP8.29□□□□□ -1.08
CCDC59-203ENST00000548126 LMCD1Q9NZU5 365 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 RABGAP1Q9Y3P9 1069 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 ATAD5Q96QE3 1844 aa8.29□□□□□ -1.08
CCDC59-203ENST00000548126 A0A1W2PQ45 241 aaPredicted RBP8.28□□□□□ -1.08
CCDC59-203ENST00000548126 A0A1W2PQY0 241 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 RFXAPO00287 272 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 TSPAN15O95858 294 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 LDHBP07195 334 aaKnown RBP8.28□□□□□ -1.08
CCDC59-203ENST00000548126 NME2P22392 152 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 PRDX5P30044 214 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 RABGGTBP53611 331 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 GNAI1P63096 354 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 FAM47AQ5JRC9 791 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 PRAMEF19Q5SWL8 479 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 ERMP1Q7Z2K6 904 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 RNF180Q86T96 592 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 DPP9Q86TI2 863 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 CCDC146Q8IYE0 955 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 KCT2Q8NC54 265 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 DNAAF4Q8WXU2 420 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 ALKBH8Q96BT7 664 aaKnown RBP8.28□□□□□ -1.08
CCDC59-203ENST00000548126 DDX4Q9NQI0 724 aaKnown RBP8.28□□□□□ -1.08
CCDC59-203ENST00000548126 IFT57Q9NWB7 429 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 DCTN4Q9UJW0 460 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 TBX21Q9UL17 535 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 PCDHA11Q9Y5I1 949 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 MYH2Q9UKX2 1941 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 MYO15AQ9UKN7 3530 aa8.28□□□□□ -1.08
CCDC59-203ENST00000548126 MYH13Q9UKX3 1938 aa8.27□□□□□ -1.09
CCDC59-203ENST00000548126 DCXO43602 365 aa8.27□□□□□ -1.09
CCDC59-203ENST00000548126 CNMDO75829 334 aa8.27□□□□□ -1.09
CCDC59-203ENST00000548126 PDE8BO95263 885 aa8.27□□□□□ -1.09
CCDC59-203ENST00000548126 FGBP02675 491 aa8.27□□□□□ -1.09
CCDC59-203ENST00000548126 PICALMQ13492 652 aa8.27□□□□□ -1.09
CCDC59-203ENST00000548126 RRP1BQ14684 758 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms