RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 RRP36Q96EU6 259 aaKnown RBP16.88■□□□□ 0.29
RTN3-214ENST00000545432 ADAM2Q99965 735 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 LZTS2Q9BRK4 669 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 MTA3Q9BTC8 594 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 PSTPIP2Q9H939 334 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 CDHR5Q9HBB8 845 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 JPH1Q9HDC5 661 aaPredicted RBP16.88■□□□□ 0.29
RTN3-214ENST00000545432 TMEM161AQ9NX61 479 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 SLC9A2Q9UBY0 812 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 TRPC6Q9Y210 931 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 NR2E1Q9Y466 385 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
RTN3-214ENST00000545432 CACNA1AO00555 2505 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 MYO10Q9HD67 2058 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 FNDC1Q4ZHG4 1894 aaPredicted RBP16.87■□□□□ 0.29
RTN3-214ENST00000545432 BRD1O95696 1058 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 LAG3P18627 525 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 STAT5BP51692 787 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 ITIH3Q06033 890 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 DSC3Q14574 896 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 TMEM266Q2M3C6 531 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 ODR4Q5SWX8 454 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 TEX2Q8IWB9 1127 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 THNSL1Q8IYQ7 743 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 TRAPPC12Q8WVT3 735 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 NECTIN4Q96NY8 510 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 ADAM7Q9H2U9 754 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 AZI2Q9H6S1 392 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 KCNH7Q9NS40 1196 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 HCSTQ9UBK5 93 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 PUF60Q9UHX1 559 aaKnown RBP16.87■□□□□ 0.29
RTN3-214ENST00000545432 ST3GAL5Q9UNP4 418 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 DCHS1Q96JQ0 3298 aa16.87■□□□□ 0.29
RTN3-214ENST00000545432 HIDE1A8MVS5 230 aa16.86■□□□□ 0.29
RTN3-214ENST00000545432 GPR182O15218 404 aa16.86■□□□□ 0.29
RTN3-214ENST00000545432 RPS6KA5O75582 802 aa16.86■□□□□ 0.29
RTN3-214ENST00000545432 CLCN5P51795 746 aa16.86■□□□□ 0.29
RTN3-214ENST00000545432 ACTR2P61160 394 aa16.86■□□□□ 0.29
RTN3-214ENST00000545432 NFX1Q12986 1120 aaKnown RBP16.86■□□□□ 0.29
RTN3-214ENST00000545432 MTMR3Q13615 1198 aa16.86■□□□□ 0.29
RTN3-214ENST00000545432 SART3Q15020 963 aaKnown RBP16.86■□□□□ 0.29
RTN3-214ENST00000545432 LRRC55Q6ZSA7 311 aa16.86■□□□□ 0.29
RTN3-214ENST00000545432 SRBD1Q8N5C6 995 aaKnown RBP16.86■□□□□ 0.29
RTN3-214ENST00000545432 NCOA7Q8NI08 942 aa16.86■□□□□ 0.29
RTN3-214ENST00000545432 MXRA8Q9BRK3 442 aa16.86■□□□□ 0.29
RTN3-214ENST00000545432 RNF19AQ9NV58 838 aa16.86■□□□□ 0.29
RTN3-214ENST00000545432 TAF6LQ9Y6J9 622 aa16.86■□□□□ 0.29
RTN3-214ENST00000545432 C2CD4DB7Z1M9 353 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 E7EWF7 191 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 DDAH1O94760 285 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 KLRC1P26715 233 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 PDE4AP27815 886 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 TPRNQ4KMQ1 711 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 ASTLQ6HA08 431 aaPredicted RBP16.85■□□□□ 0.29
RTN3-214ENST00000545432 MB21D2Q8IYB1 491 aaPredicted RBP16.85■□□□□ 0.29
RTN3-214ENST00000545432 ZDHHC14Q8IZN3 488 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 MRPL43Q8N983 215 aaKnown RBP16.85■□□□□ 0.29
RTN3-214ENST00000545432 PIBF1Q8WXW3 757 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 CASP10Q92851 521 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 CASD1Q96PB1 797 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 TCF25Q9BQ70 676 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 TMEM117Q9H0C3 514 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 POMKQ9H5K3 350 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 ATP6V0A4Q9HBG4 840 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 PCDHA6Q9UN73 950 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 PCDHA8Q9Y5H6 950 aa16.85■□□□□ 0.29
RTN3-214ENST00000545432 ZBTB42B2RXF5 422 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 HBP1O60381 514 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 KIF5BP33176 963 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 GNAQP50148 359 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 CRYBB1P53674 252 aaPredicted RBP16.84■□□□□ 0.29
RTN3-214ENST00000545432 APOBRQ0VD83 1088 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 SPOUT1Q5T280 376 aaKnown RBP16.84■□□□□ 0.29
RTN3-214ENST00000545432 PLPP4Q5VZY2 271 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 KCNT2Q6UVM3 1135 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 ABHD15Q6UXT9 468 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 FAM228AQ86W67 206 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 LY9Q9HBG7 655 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 USTQ9Y2C2 406 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 COL1A2P08123 1366 aa16.84■□□□□ 0.29
RTN3-214ENST00000545432 DENND3A2RUS2 1198 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 C2orf71A6NGG8 1288 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 MEIS1O00470 390 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 FGFR1P11362 822 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 PPM1AP35813 382 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 PTH1RQ03431 593 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 ITGB3BPQ13352 177 aaPredicted RBP16.83■□□□□ 0.28
RTN3-214ENST00000545432 ZBTB33Q86T24 672 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 LOXHD1Q8IVV2 1947 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 ZNF654Q8IZM8 581 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 CTCFLQ8NI51 663 aaPredicted RBP16.83■□□□□ 0.28
RTN3-214ENST00000545432 CYP2W1Q8TAV3 490 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 RWDD1Q9H446 243 aaPredicted RBP16.83■□□□□ 0.28
RTN3-214ENST00000545432 PKD2L1Q9P0L9 805 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 SEC63Q9UGP8 760 aaKnown RBP16.83■□□□□ 0.28
RTN3-214ENST00000545432 CDH22Q9UJ99 828 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 HCFC2Q9Y5Z7 792 aa16.83■□□□□ 0.28
RTN3-214ENST00000545432 SPDYE3A6NKU9 549 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 GPR32O75388 356 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 PLEKHA8P1O95397 391 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms