RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 MAGEB6Q8N7X4 407 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 SLC13A1Q9BZW2 595 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 RNF38Q9H0F5 515 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 C14orf119Q9NWQ9 140 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 CLDND1Q9NY35 253 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 PLA2G2DQ9UNK4 145 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 LUC7L2Q9Y383 392 aaKnown RBP5.37□□□□□ -1.55
SNHG1-222ENST00000545308 F8W031 263 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-222ENST00000545308 KCNK3O14649 394 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 MYO1BO43795 1136 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 CAND2O75155 1236 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 TBC1D8O95759 1140 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 CORO7P57737 925 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 HTRA3P83110 453 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 PRR5P85299 388 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 ODF1Q14990 250 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 CRY1Q16526 586 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 DDB1Q16531 1140 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 ARHGAP44Q17R89 818 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 ZXDCQ2QGD7 858 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-222ENST00000545308 SAPCD2Q86UD0 394 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 TPH2Q8IWU9 490 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 ADGRG2Q8IZP9 1017 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 C1orf162Q8NEQ5 155 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-222ENST00000545308 NLGN2Q8NFZ4 835 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 SLC39A13Q96H72 371 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 PSMD1Q99460 953 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 BOCQ9BWV1 1114 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 MS4A5Q9H3V2 200 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 ARNT2Q9HBZ2 717 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 TCF7L1Q9HCS4 588 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 BTG4Q9NY30 223 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 CNOT11Q9UKZ1 510 aaKnown RBP5.36□□□□□ -1.55
SNHG1-222ENST00000545308 PMF1-BGLAPU3KQ54 211 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 FANCD2Q9BXW9 1451 aa5.36□□□□□ -1.55
SNHG1-222ENST00000545308 A0A1B0GTL3 188 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 H7BY64 318 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 PCDHGA12O60330 932 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 NPHS1O60500 1241 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 KRT37O76014 449 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 COL6A2P12110 1019 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 NCAM1P13591 858 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 KRT15P19012 456 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 SLC9A1P19634 815 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 FPR2P25090 351 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 FAPQ12884 760 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 TCIRG1Q13488 830 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 UBE4AQ14139 1066 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 TERF2Q15554 542 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 HABP4Q5JVS0 413 aaKnown RBP5.35□□□□□ -1.55
SNHG1-222ENST00000545308 UBXN11Q5T124 520 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 NT5DC1Q5TFE4 455 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 CEP68Q76N32 757 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 Q8N1Y9 231 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 SH3RF2Q8TEC5 729 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 ZNF526Q8TF50 670 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-222ENST00000545308 FAXDC2Q96IV6 333 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 SPATA25Q9BR10 227 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 CHST12Q9NRB3 414 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 TOPORSQ9NS56 1045 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-222ENST00000545308 USP40Q9NVE5 1235 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 GULP1Q9UBP9 304 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 PCDHGA9Q9Y5G4 932 aaKnown RBP5.35□□□□□ -1.55
SNHG1-222ENST00000545308 PCDHGA8Q9Y5G5 932 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 PCDHGA7Q9Y5G6 932 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 PCDHGA6Q9Y5G7 932 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 PCDHGA3Q9Y5H0 932 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 PCDHGA2Q9Y5H1 932 aa5.35□□□□□ -1.55
SNHG1-222ENST00000545308 SLC12A8A0AV02 714 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 SH3D21A4FU49 640 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 NKRFO15226 690 aaKnown RBP eCLIP5.34□□□□□ -1.55
SNHG1-222ENST00000545308 RBP3P10745 1247 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 TACR1P25103 407 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 GTF2A2P52657 109 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 SMAD3P84022 425 aaKnown RBP5.34□□□□□ -1.55
SNHG1-222ENST00000545308 IRF9Q00978 393 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 LRRC32Q14392 662 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 GPR19Q15760 415 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 SMAD2Q15796 467 aaKnown RBP5.34□□□□□ -1.55
SNHG1-222ENST00000545308 HHIPL2Q6UWX4 724 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 ARHGAP36Q6ZRI8 547 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 PTRH1Q86Y79 214 aaKnown RBP5.34□□□□□ -1.55
SNHG1-222ENST00000545308 NOSTRINQ8IVI9 506 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 TEX2Q8IWB9 1127 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 EXOC8Q8IYI6 725 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 CPA6Q8N4T0 437 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 TMEM169Q96HH4 297 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 ELF4Q99607 663 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-222ENST00000545308 KRTAP17-1Q9BYP8 105 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 SPO11Q9Y5K1 396 aa5.34□□□□□ -1.55
SNHG1-222ENST00000545308 ABCC8Q09428 1581 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 LCHNA4D1U4 455 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 H7C1D1 291 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 K7ESM1 405 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 MAN2B1O00754 1011 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 H2AFYO75367 372 aaKnown RBP5.33□□□□□ -1.56
SNHG1-222ENST00000545308 SNUPNO95149 360 aaKnown RBP5.33□□□□□ -1.56
SNHG1-222ENST00000545308 KRT18P05783 430 aaKnown RBP5.33□□□□□ -1.56
SNHG1-222ENST00000545308 ASGR2P07307 311 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 GLI4P10075 376 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms