RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 PSMC5P62195 406 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 TROAPQ12815 778 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 GEN1Q17RS7 908 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 DNAJC24Q6P3W2 148 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 SNX25Q9H3E2 840 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 EPB41L5Q9HCM4 733 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 ARHGAP23Q9P227 1491 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 CLDN3O15551 220 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 LDHAP00338 332 aaKnown RBP12.32□□□□□ -0.44
TNC-211ENST00000537320 NEDD9Q14511 834 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 COL23A1Q86Y22 540 aaPredicted RBP12.32□□□□□ -0.44
TNC-211ENST00000537320 NME8Q8N427 588 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 BBOF1Q8ND07 529 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 KCNB2Q92953 911 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 MRPL47Q9HD33 250 aaKnown RBP12.32□□□□□ -0.44
TNC-211ENST00000537320 ZNF302Q9NR11 478 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 PRR12Q9ULL5 1215 aa12.32□□□□□ -0.44
TNC-211ENST00000537320 PDS5AQ29RF7 1337 aaKnown RBP12.31□□□□□ -0.44
TNC-211ENST00000537320 A6NJR5 290 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 H7C0C1 242 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 SEC31AO94979 1220 aaKnown RBP12.31□□□□□ -0.44
TNC-211ENST00000537320 ATP5OP48047 213 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 EZH2Q15910 746 aaKnown RBP12.31□□□□□ -0.44
TNC-211ENST00000537320 NAALADL2Q58DX5 795 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 CABS1Q96KC9 395 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 KCNB1Q14721 858 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 HPS3Q969F9 1004 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 PDLIM2Q96JY6 352 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 SEPT10Q9P0V9 454 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 SEL1LQ9UBV2 794 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 DAAM1Q9Y4D1 1078 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 ATP1A2P50993 1020 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 EPHA7Q15375 998 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 MAPK6Q16659 721 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 ABI1Q8IZP0 508 aa12.31□□□□□ -0.44
TNC-211ENST00000537320 MYO1EQ12965 1108 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 SNX1Q13596 522 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 CATSPER4Q7RTX7 472 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 C10orf67Q8IYJ2 551 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 TBC1D31Q96DN5 1066 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 FAM213AQ9BRX8 229 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 TMEM39BQ9GZU3 492 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 JMJD4Q9H9V9 463 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 PDE11AQ9HCR9 933 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 TTC26A0AVF1 554 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 ARHGEF37A1IGU5 675 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 WDR46O15213 610 aaKnown RBP12.3□□□□□ -0.44
TNC-211ENST00000537320 ZSCAN20P17040 1043 aaPredicted RBP12.3□□□□□ -0.44
TNC-211ENST00000537320 GABPAQ06546 454 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 SEMA3FQ13275 785 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 SGO2Q562F6 1265 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 RFX6Q8HWS3 928 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 VCPKMTQ9H867 229 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.3□□□□□ -0.44
TNC-211ENST00000537320 RNF14Q9UBS8 474 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 BCL9O00512 1426 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 RICTORQ6R327 1708 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 MED7O43513 233 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 COG2Q14746 738 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 PRAMEF18Q5VWM3 479 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 LPAR1Q92633 364 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 MAP3K14Q99558 947 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 SPON1Q9HCB6 807 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 EYA4O95677 639 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 STX2P32856 288 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 PHBP35232 272 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 ANKRD40Q6AI12 368 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 CCT6BQ92526 530 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 PBKQ96KB5 322 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 MTRQ99707 1265 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 PCDHA10Q9Y5I2 948 aa12.3□□□□□ -0.44
TNC-211ENST00000537320 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.3□□□□□ -0.44
TNC-211ENST00000537320 GOLGA8KD6RF30 607 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 UBE2Q2LH0YL09 131 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 MAN1A1P33908 653 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 ANGEL2Q5VTE6 544 aaKnown RBP12.29□□□□□ -0.44
TNC-211ENST00000537320 RINT1Q6NUQ1 792 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 C3orf67Q6ZVT6 689 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 SMAP1Q8IYB5 467 aaPredicted RBP12.29□□□□□ -0.44
TNC-211ENST00000537320 PSPC1Q8WXF1 523 aaKnown RBP12.29□□□□□ -0.44
TNC-211ENST00000537320 ZMYND12Q9H0C1 365 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 NWD1Q149M9 1564 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 TNS2Q63HR2 1409 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 ZNF394Q53GI3 561 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 CEP57Q86XR8 500 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 DPF2Q92785 391 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 NPHP3-ACAD11A0A0J9YXS1 232 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 SGK1O00141 431 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 NFX1Q12986 1120 aaKnown RBP12.29□□□□□ -0.44
TNC-211ENST00000537320 TTLL4Q14679 1199 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 OR6B2Q6IFH4 312 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 SPATA24Q86W54 205 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 ATP2A3Q93084 1043 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 HEXIM2Q96MH2 286 aaKnown RBP12.29□□□□□ -0.44
TNC-211ENST00000537320 TMEM60Q9H2L4 133 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 KIAA1586Q9HCI6 787 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 FAM114A2Q9NRY5 505 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 HOMER3Q9NSC5 361 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 EIF3CLB5ME19 914 aaKnown RBP12.29□□□□□ -0.44
TNC-211ENST00000537320 GIPC1O14908 333 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms