RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 YEATS4O95619 227 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 OATP04181 439 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 ACRP10323 421 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 XRCC6P12956 609 aaKnown RBP eCLIP19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 MARK3P27448 753 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 LONP1P36776 959 aaKnown RBP19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 PLCB4Q15147 1175 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 CCDC85BQ15834 202 aaPredicted RBP19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 PTGISQ16647 500 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 KRT79Q5XKE5 535 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 TAF2Q6P1X5 1199 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 RSPH3Q86UC2 560 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 ZNF710Q8N1W2 664 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 IGSF22Q8N9C0 903 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 HERVK_113Q902F9 699 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 EIF2AK1Q9BQI3 630 aaKnown RBP19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 JPH2Q9BR39 696 aaPredicted RBP19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 POLR3CQ9BUI4 534 aaPredicted RBP19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 RNPEPQ9H4A4 650 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 RBM19Q9Y4C8 960 aaKnown RBP19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 REV3LO60673 3130 aa19.68■□□□□ 0.74
PACSIN3-202ENST00000524509 EML1O00423 815 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 MAGEB2O15479 319 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 CAND2O75155 1236 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 LYPLA2O95372 231 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 CD4P01730 458 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 IGFBP4P22692 258 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 RPA1P27694 616 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 NASPP49321 788 aaPredicted RBP19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 PTK7Q13308 1070 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 BFSP2Q13515 415 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 SLC39A14Q15043 492 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 STK38Q15208 465 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 GRIK4Q16099 956 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 CAGE1Q8TC20 777 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 KCNG4Q8TDN1 519 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 FAM122AQ96E09 287 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 HSD17B14Q9BPX1 270 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 PPP1R12CQ9BZL4 782 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 MTIF3Q9H2K0 278 aaKnown RBP19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 SLC28A3Q9HAS3 691 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 IL23AQ9NPF7 189 aa19.67■□□□□ 0.74
PACSIN3-202ENST00000524509 XIRP2A4UGR9 3374 aa19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 PARNO95453 639 aaKnown RBP19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 INSRRP14616 1297 aa19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 HOXC8P31273 242 aa19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 KRT85P78386 507 aa19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 PRKCEQ02156 737 aa19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 FOXD4L5Q5VV16 416 aaPredicted RBP19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 TPH2Q8IWU9 490 aa19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 RETREG2Q8NC44 543 aa19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 FOXD4L4Q8WXT5 416 aaPredicted RBP19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 CCDC43Q96MW1 224 aaKnown RBP19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 LXNQ9BS40 222 aa19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 NIFKQ9BYG3 293 aaKnown RBP19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 TELO2Q9Y4R8 837 aa19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 SRPRBQ9Y5M8 271 aaKnown RBP19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 KDM3AQ9Y4C1 1321 aa19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 GBF1Q92538 1859 aa19.66■□□□□ 0.74
PACSIN3-202ENST00000524509 VWA3AA6NCI4 1184 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 POTEMA6NI47 508 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 B4GALT4O60513 344 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 PPP6R2O75170 966 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 SLITRK3O94933 977 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 TMOD1P28289 359 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 TXLNAP40222 546 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 GDF6Q6KF10 455 aaPredicted RBP19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 BANK1Q8NDB2 785 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 DYDC2Q96IM9 177 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 NACC1Q96RE7 527 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 USP28Q96RU2 1077 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 NT5C3AQ9H0P0 336 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 TSPYL2Q9H2G4 693 aaPredicted RBP19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 NKX2-4Q9H2Z4 354 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 ANKEF1Q9NU02 776 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 SETD4Q9NVD3 440 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 CXXC1Q9P0U4 656 aaPredicted RBP19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 TUBE1Q9UJT0 475 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 CLIC4Q9Y696 253 aa19.65■□□□□ 0.74
PACSIN3-202ENST00000524509 SCN10AQ9Y5Y9 1956 aa19.64■□□□□ 0.74
PACSIN3-202ENST00000524509 DDX11L8A8MPP1 907 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 PITPNM1O00562 1244 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 SPTLC2O15270 562 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 FGBP02675 491 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 CYP2C18P33260 490 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 CCT6AP40227 531 aaKnown RBP19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 UBA7P41226 1012 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 CDC42EP1Q00587 391 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 PKP1Q13835 747 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 PTPAQ15257 358 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 NME8Q8N427 588 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 KRI1Q8N9T8 703 aaKnown RBP19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 LINC00301Q8NCQ3 95 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 LMBR1Q8WVP7 490 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 CDK5RAP3Q96JB5 506 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 SCAND2PQ9GZW5 306 aaPredicted RBP19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 TRPV6Q9H1D0 765 aa19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 TRMT13Q9NUP7 481 aaKnown RBP19.64■□□□□ 0.73
PACSIN3-202ENST00000524509 TRANK1O15050 2925 aa19.63■□□□□ 0.73
PACSIN3-202ENST00000524509 MBLAC1A4D2B0 266 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms