RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 NT5C1AQ9BXI3 368 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 NRSN2Q9GZP1 204 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 SPATC1LQ9H0A9 340 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 STARD7Q9NQZ5 370 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 RAI14Q9P0K7 980 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 MSRAQ9UJ68 235 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 PDS5AQ29RF7 1337 aaKnown RBP5.87□□□□□ -1.47
HTT-211ENST00000513326 TRANK1O15050 2925 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 PARP14Q460N5 1801 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 ROBO3Q96MS0 1386 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 A0A0A0MRY4 1105 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 DCDC2CA8MYV0 355 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 DEAF1O75398 565 aaPredicted RBP5.86□□□□□ -1.47
HTT-211ENST00000513326 MAOBP27338 520 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 CD68P34810 354 aaPredicted RBP5.86□□□□□ -1.47
HTT-211ENST00000513326 CDK7P50613 346 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 RAC1P63000 192 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 SNRPNP63162 240 aaKnown RBP5.86□□□□□ -1.47
HTT-211ENST00000513326 HNRNPUQ00839 825 aaKnown RBP eCLIP5.86□□□□□ -1.47
HTT-211ENST00000513326 RAB30Q15771 203 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 KCNA10Q16322 511 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 HP1BP3Q5SSJ5 553 aaPredicted RBP5.86□□□□□ -1.47
HTT-211ENST00000513326 SPTY2D1Q68D10 685 aaPredicted RBP5.86□□□□□ -1.47
HTT-211ENST00000513326 FBXO11Q86XK2 927 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 FAM126BQ8IXS8 530 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 SPATA5Q8NB90 893 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 KLHDC9Q8NEP7 349 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 GRIN3AQ8TCU5 1115 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 RASGRP4Q8TDF6 673 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 ATG4CQ96DT6 458 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 TRIM11Q96F44 468 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 DRC1Q96MC2 740 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 TOX2Q96NM4 488 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 UIMC1Q96RL1 719 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 KIAA1683Q9H0B3 1180 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 WNT8AQ9H1J5 351 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 SLC28A3Q9HAS3 691 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 IL23AQ9NPF7 189 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 KRT82Q9NSB4 513 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 MKL2Q9ULH7 1088 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 PCDHB5Q9Y5E4 795 aa5.86□□□□□ -1.47
HTT-211ENST00000513326 ZNFX1Q9P2E3 1918 aaKnown RBP5.86□□□□□ -1.47
HTT-211ENST00000513326 COL11A1P12107 1806 aaPredicted RBP5.85□□□□□ -1.47
HTT-211ENST00000513326 ZDBF2Q9HCK1 2354 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 ZNF521Q96K83 1311 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 CTAGE5O15320 804 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 LPXNO60711 386 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 SNAI1O95863 264 aaPredicted RBP5.85□□□□□ -1.47
HTT-211ENST00000513326 F13A1P00488 732 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 CA3P07451 260 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 SHMT1P34896 483 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 IL15P40933 162 aaPredicted RBP5.85□□□□□ -1.47
HTT-211ENST00000513326 CCL23P55773 120 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 NLRP12P59046 1061 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 ARID5AQ03989 594 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 PLS1Q14651 629 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 TTLL4Q14679 1199 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 SEPT2Q15019 361 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 ZNF792Q3KQV3 632 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 TATDN1Q6P1N9 297 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 PSRC1Q6PGN9 363 aaPredicted RBP5.85□□□□□ -1.47
HTT-211ENST00000513326 RNF180Q86T96 592 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 FMR1NBQ8N0W7 255 aaPredicted RBP5.85□□□□□ -1.47
HTT-211ENST00000513326 GATAD2BQ8WXI9 593 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 KCNB2Q92953 911 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 EAF1Q96JC9 268 aaPredicted RBP5.85□□□□□ -1.47
HTT-211ENST00000513326 PLVAPQ9BX97 442 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 USP26Q9BXU7 913 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 TANGO6Q9C0B7 1094 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 DHX36Q9H2U1 1008 aaKnown RBP5.85□□□□□ -1.47
HTT-211ENST00000513326 PIH1D3Q9NQM4 214 aaKnown RBP5.85□□□□□ -1.47
HTT-211ENST00000513326 FBXO28Q9NVF7 368 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 CACNA2D2Q9NY47 1150 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 DDX49Q9Y6V7 483 aaKnown RBP5.85□□□□□ -1.47
HTT-211ENST00000513326 MYH1P12882 1939 aa5.85□□□□□ -1.47
HTT-211ENST00000513326 SCN5AQ14524 2016 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 MCM3APO60318 1980 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 GRIN2DO15399 1336 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 FAM221AA4D161 298 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 PRR33A8MZF0 331 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 CD4P01730 458 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 IL9P15248 144 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 DNAJA1P31689 397 aaKnown RBP5.84□□□□□ -1.47
HTT-211ENST00000513326 PLCD1P51178 756 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 GSTO1P78417 241 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 BEX3Q00994 111 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 APOBRQ0VD83 1088 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 GRB10Q13322 594 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 SEPT6Q14141 434 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 TMEM132BQ14DG7 1078 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 AAK1Q2M2I8 961 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 ABCB5Q2M3G0 1257 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 BNC2Q6ZN30 1099 aaPredicted RBP5.84□□□□□ -1.47
HTT-211ENST00000513326 TMCO2Q7Z6W1 182 aaPredicted RBP5.84□□□□□ -1.47
HTT-211ENST00000513326 SIAH1Q8IUQ4 282 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 FOXP4Q8IVH2 680 aaPredicted RBP5.84□□□□□ -1.47
HTT-211ENST00000513326 SPICE1Q8N0Z3 855 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 TMEM199Q8N511 208 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 MIGA1Q8NAN2 632 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 SHCBP1Q8NEM2 672 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms