RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 RALYLQ86SE5 291 aaKnown RBP8.32□□□□□ -1.08
USP46-208ENST00000512656 DHX37Q8IY37 1157 aaKnown RBP8.32□□□□□ -1.08
USP46-208ENST00000512656 ZNF295-AS1Q8N0V1 137 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 PPTC7Q8NI37 304 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 PXMP2Q9NR77 195 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 ZDHHC3Q9NYG2 299 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 COL20A1Q9P218 1284 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 DDX41Q9UJV9 622 aaKnown RBP8.32□□□□□ -1.08
USP46-208ENST00000512656 PCDHGA11Q9Y5H2 935 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 PCDHA1Q9Y5I3 950 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 PALM3A6NDB9 673 aaPredicted RBP8.31□□□□□ -1.08
USP46-208ENST00000512656 A6NJY4 79 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 GCOM1H8Y6P7 765 aaPredicted RBP8.31□□□□□ -1.08
USP46-208ENST00000512656 BACH1O14867 736 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 IFIT3O14879 490 aaKnown RBP8.31□□□□□ -1.08
USP46-208ENST00000512656 EFCAB14O75071 495 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 PPFIA4O75335 1185 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 CA3P07451 260 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 POLR2MP0CAP2 368 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 TGFB3P10600 412 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 MYOGP15173 224 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 SELPP16109 830 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 FGFR3P22607 806 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 GHRHRQ02643 423 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 SEC23AQ15436 765 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 CCDC85BQ15834 202 aaPredicted RBP8.31□□□□□ -1.08
USP46-208ENST00000512656 AAK1Q2M2I8 961 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 TTC22Q5TAA0 569 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 GDF6Q6KF10 455 aaPredicted RBP8.31□□□□□ -1.08
USP46-208ENST00000512656 STOX1Q6ZVD7 989 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 HERC6Q8IVU3 1022 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 STAG2Q8N3U4 1231 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 VWCEQ96DN2 955 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 MTMR8Q96EF0 704 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 ASB2Q96Q27 587 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 PRDM6Q9NQX0 595 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 MAD2L2Q9UI95 211 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 PCDHGC4Q9Y5F7 938 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 LAMA4Q16363 1823 aa8.31□□□□□ -1.08
USP46-208ENST00000512656 CNTNAP5Q8WYK1 1306 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 BNIP3LO60238 219 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 F2P00734 622 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 MYCLP12524 364 aaPredicted RBP8.3□□□□□ -1.08
USP46-208ENST00000512656 POU3F3P20264 500 aaPredicted RBP8.3□□□□□ -1.08
USP46-208ENST00000512656 ATP4AP20648 1035 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 CCND2P30279 289 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 RBL2Q08999 1139 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 PTK7Q13308 1070 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 GRM4Q14833 912 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 WTAPQ15007 396 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 KIAA0753Q2KHM9 967 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 GNPTABQ3T906 1256 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 CNKSR3Q6P9H4 555 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 CYB5R4Q7L1T6 521 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 LRRC8DQ7L1W4 858 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 CATIPQ7Z7H3 387 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 ALYREFQ86V81 257 aaKnown RBP8.3□□□□□ -1.08
USP46-208ENST00000512656 VSIG10LQ86VR7 867 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 HOMER1Q86YM7 354 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 MICALL1Q8N3F8 863 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 NCOA7Q8NI08 942 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 PPP1R13LQ8WUF5 828 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 KAT2BQ92831 832 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 SPATA33Q96N06 139 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 PDCD2LQ9BRP1 358 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 ALG1Q9BT22 464 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 RIOX1Q9H6W3 641 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 MLXIPQ9HAP2 919 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 HDAC6Q9UBN7 1215 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 GTF2IRD1Q9UHL9 959 aa8.3□□□□□ -1.08
USP46-208ENST00000512656 EMSYQ7Z589 1322 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 ABHD14A-ACY1A0A1B0GW23 586 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 PIK3CDO00329 1044 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 OPLAHO14841 1288 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 PPP1R11O60927 126 aaPredicted RBP8.29□□□□□ -1.08
USP46-208ENST00000512656 STAM2O75886 525 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 GGPS1O95749 300 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 CXCL10P02778 98 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 CYP21A2P08686 494 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 CKBP12277 381 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 BMP4P12644 408 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 HOXD8P13378 290 aaPredicted RBP8.29□□□□□ -1.08
USP46-208ENST00000512656 GSPT1P15170 499 aaKnown RBP8.29□□□□□ -1.08
USP46-208ENST00000512656 CHMLP26374 656 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 HOXA13P31271 388 aaPredicted RBP8.29□□□□□ -1.08
USP46-208ENST00000512656 KIF5BP33176 963 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 IKBKEQ14164 716 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 PGM5Q15124 567 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 CELF3Q5SZQ8 465 aaKnown RBP8.29□□□□□ -1.08
USP46-208ENST00000512656 SLCO4C1Q6ZQN7 724 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 ADAMTS19Q8TE59 1207 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 ABHD17AQ96GS6 310 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 PIGSQ96S52 555 aa8.29□□□□□ -1.08
USP46-208ENST00000512656 DNAAF2Q9NVR5 837 aaKnown RBP8.29□□□□□ -1.08
USP46-208ENST00000512656 PRRC2BQ5JSZ5 2229 aaKnown RBP8.28□□□□□ -1.08
USP46-208ENST00000512656 E7EWF7 191 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 HAS3O00219 553 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 NOP56O00567 594 aaKnown RBP8.28□□□□□ -1.08
USP46-208ENST00000512656 SGSM2O43147 1006 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms