RNA–Protein interactions for RNA: ENST00000507208.1

MBD4-206, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD4, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-206ENST00000507208 CUL5Q93034 780 aa17.65■□□□□ 0.42
MBD4-206ENST00000507208 COA7Q96BR5 231 aa17.65■□□□□ 0.42
MBD4-206ENST00000507208 CCDC114Q96M63 670 aa17.65■□□□□ 0.42
MBD4-206ENST00000507208 SPAG5Q96R06 1193 aa17.65■□□□□ 0.42
MBD4-206ENST00000507208 PSMD1Q99460 953 aa17.65■□□□□ 0.42
MBD4-206ENST00000507208 DDX47Q9H0S4 455 aaKnown RBP17.65■□□□□ 0.42
MBD4-206ENST00000507208 METTL14Q9HCE5 456 aaKnown RBP17.65■□□□□ 0.42
MBD4-206ENST00000507208 KCNMB3Q9NPA1 279 aa17.65■□□□□ 0.42
MBD4-206ENST00000507208 MTMR4Q9NYA4 1195 aa17.65■□□□□ 0.42
MBD4-206ENST00000507208 NARFQ9UHQ1 456 aa17.65■□□□□ 0.42
MBD4-206ENST00000507208 PCDHA12Q9UN75 941 aa17.65■□□□□ 0.42
MBD4-206ENST00000507208 GAKO14976 1311 aa17.65■□□□□ 0.42
MBD4-206ENST00000507208 LY75O60449 1722 aa17.65■□□□□ 0.42
MBD4-206ENST00000507208 CYP3A7-CYP3A51PA0A087WV96 503 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 TULP1O00294 542 aaPredicted RBP17.64■□□□□ 0.42
MBD4-206ENST00000507208 PDXKO00764 312 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 ERCC3P19447 782 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 CYP3A7P24462 503 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 RDXP35241 583 aaKnown RBP17.64■□□□□ 0.42
MBD4-206ENST00000507208 BTDP43251 543 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 PTENP60484 403 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 ARID5AQ03989 594 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 QPCTQ16769 361 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 HERC4Q5GLZ8 1057 aaPredicted RBP17.64■□□□□ 0.42
MBD4-206ENST00000507208 ERMARDQ5T6L9 678 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 GKAP1Q5VSY0 366 aaPredicted RBP17.64■□□□□ 0.42
MBD4-206ENST00000507208 CYB5D1Q6P9G0 228 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 HOOK3Q86VS8 718 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 CCT6BQ92526 530 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 RAB17Q9H0T7 212 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 VAT1LQ9HCJ6 419 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 SIX2Q9NPC8 291 aa17.64■□□□□ 0.42
MBD4-206ENST00000507208 LOC102724159A0A0B4J2E5 919 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 DAPK3O43293 454 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 GSTA1P08263 222 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 MRPL12P52815 198 aaKnown RBP17.64■□□□□ 0.41
MBD4-206ENST00000507208 RHBDL3P58872 404 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 PWP2Q15269 919 aaKnown RBP17.64■□□□□ 0.41
MBD4-206ENST00000507208 GRIK5Q16478 980 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 DDX42Q86XP3 938 aaKnown RBP eCLIP17.64■□□□□ 0.41
MBD4-206ENST00000507208 CCDC125Q86Z20 511 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 NELFCDQ8IXH7 590 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 PARP9Q8IXQ6 854 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 TEX11Q8IYF3 940 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 OR2W6PQ8NHA6 318 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 OLIG1Q8TAK6 271 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 RBM46Q8TBY0 533 aaKnown RBP17.64■□□□□ 0.41
MBD4-206ENST00000507208 ATP8B4Q8TF62 1192 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 UBLCP1Q8WVY7 318 aaPredicted RBP17.64■□□□□ 0.41
MBD4-206ENST00000507208 FAM129AQ9BZQ8 928 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 UBA5Q9GZZ9 404 aa17.64■□□□□ 0.41
MBD4-206ENST00000507208 UTP11Q9Y3A2 253 aaKnown RBP17.64■□□□□ 0.41
MBD4-206ENST00000507208 DNM1LO00429 736 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 PLSCR1O15162 318 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 KIF1CO43896 1103 aaKnown RBP17.63■□□□□ 0.41
MBD4-206ENST00000507208 FERP16591 822 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 BAG6P46379 1132 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 DRG2P55039 364 aaKnown RBP17.63■□□□□ 0.41
MBD4-206ENST00000507208 RNASE9P60153 205 aaKnown RBP17.63■□□□□ 0.41
MBD4-206ENST00000507208 ZNF543Q08ER8 600 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 SNCBQ16143 134 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 NBPF9Q3BBW0 867 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 CROCCP2Q86T23 111 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 PGM2Q96G03 612 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 JPH2Q9BR39 696 aaPredicted RBP17.63■□□□□ 0.41
MBD4-206ENST00000507208 DHX36Q9H2U1 1008 aaKnown RBP17.63■□□□□ 0.41
MBD4-206ENST00000507208 CCDC134Q9H6E4 229 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.63■□□□□ 0.41
MBD4-206ENST00000507208 JAG2Q9Y219 1238 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 FAM187AA6NFU0 413 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 SCTRP47872 440 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 NFIL3Q16649 462 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 KNOP1Q1ED39 458 aaKnown RBP17.63■□□□□ 0.41
MBD4-206ENST00000507208 ARSHQ5FYA8 562 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 RC3H1Q5TC82 1133 aaKnown RBP17.63■□□□□ 0.41
MBD4-206ENST00000507208 FMNL3Q8IVF7 1028 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 SLC30A5Q8TAD4 765 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 NAP1L3Q99457 506 aaPredicted RBP17.63■□□□□ 0.41
MBD4-206ENST00000507208 AP1M1Q9BXS5 423 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 CARD9Q9H257 536 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 JMJD4Q9H9V9 463 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 NOVA2Q9UNW9 492 aaKnown RBP17.63■□□□□ 0.41
MBD4-206ENST00000507208 STK24Q9Y6E0 443 aa17.63■□□□□ 0.41
MBD4-206ENST00000507208 E9PMD0 336 aa17.62■□□□□ 0.41
MBD4-206ENST00000507208 CALUO43852 315 aaPredicted RBP17.62■□□□□ 0.41
MBD4-206ENST00000507208 SLC9A1P19634 815 aa17.62■□□□□ 0.41
MBD4-206ENST00000507208 FLT3P36888 993 aa17.62■□□□□ 0.41
MBD4-206ENST00000507208 GABPAQ06546 454 aa17.62■□□□□ 0.41
MBD4-206ENST00000507208 KRT71Q3SY84 523 aa17.62■□□□□ 0.41
MBD4-206ENST00000507208 NBPF5PQ86XG9 351 aaPredicted RBP17.62■□□□□ 0.41
MBD4-206ENST00000507208 XPO6Q96QU8 1125 aaKnown RBP17.62■□□□□ 0.41
MBD4-206ENST00000507208 SETDB2Q96T68 719 aa17.62■□□□□ 0.41
MBD4-206ENST00000507208 AMACRQ9UHK6 382 aa17.62■□□□□ 0.41
MBD4-206ENST00000507208 KIAA1024Q9UPX6 916 aa17.62■□□□□ 0.41
MBD4-206ENST00000507208 DDX3XO00571 662 aaKnown RBP eCLIP17.62■□□□□ 0.413e-6■■□□□ 14.5
MBD4-206ENST00000507208 ASAP2O43150 1006 aa17.62■□□□□ 0.41
MBD4-206ENST00000507208 TTI1O43156 1089 aa17.62■□□□□ 0.41
MBD4-206ENST00000507208 MGRN1O60291 552 aa17.62■□□□□ 0.41
MBD4-206ENST00000507208 PPP1R11O60927 126 aaPredicted RBP17.62■□□□□ 0.41
MBD4-206ENST00000507208 ACTN1P12814 892 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms