RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 DAGLBQ8NCG7 672 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 SYTL5Q8TDW5 730 aaPredicted RBP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 PGBD4Q96DM1 585 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 STK25O00506 426 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 LRMPQ12912 555 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 NFX1Q12986 1120 aaKnown RBP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 SHHQ15465 462 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 SHROOM1Q2M3G4 852 aaPredicted RBP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 TTC38Q5R3I4 469 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 PPTC7Q8NI37 304 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 UPF3AQ9H1J1 476 aaKnown RBP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 NFIBO00712 420 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 RPS6KA5O75582 802 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 MMP3P08254 477 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 SFPQP23246 707 aaKnown RBP eCLIP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 CTGFP29279 349 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 TRAPPC10P48553 1259 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 ATP2C1P98194 919 aaPredicted RBP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 MORC3Q14149 939 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 METTL7BQ6UX53 244 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 CYFIP1Q7L576 1253 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 CACTINQ8WUQ7 758 aaKnown RBP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 IFIH1Q9BYX4 1025 aaKnown RBP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 JPH1Q9HDC5 661 aaPredicted RBP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 FLRT1Q9NZU1 646 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 PCDHA6Q9UN73 950 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 PCDHA4Q9UN74 947 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 INSL6Q9Y581 213 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 PCDHA8Q9Y5H6 950 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 M0R2N6 131 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 WNT7AO00755 349 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 POLR2DO15514 142 aaKnown RBP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 CCZ1BP86790 482 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 CCZ1P86791 482 aaPredicted RBP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 JAKMIP3Q5VZ66 844 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 MYLIPQ8WY64 445 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 TAL1P17542 331 aaPredicted RBP9.47□□□□□ -0.89
VPS13B-206ENST00000496144 SLC26A2P50443 739 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 GSDMDP57764 484 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 TRIML1Q8N9V2 468 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 HERVK_113Q902F9 699 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 C1QTNF1Q9BXJ1 281 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 ERLIN2O94905 339 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 DNAJB2P25686 324 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 MNX1P50219 401 aaPredicted RBP9.46□□□□□ -0.89
VPS13B-206ENST00000496144 HSP90AA2PQ14568 343 aaPredicted RBP9.46□□□□□ -0.89
VPS13B-206ENST00000496144 C1orf53Q5VUE5 145 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 MYRIPQ8NFW9 859 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 GCOM2Q9BZD3 368 aaPredicted RBP9.46□□□□□ -0.89
VPS13B-206ENST00000496144 ENTPD7Q9NQZ7 604 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 A0A087X0B3 334 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 GTF2F1P35269 517 aaKnown RBP eCLIP9.46□□□□□ -0.892e-7■■■■■ 26.9
VPS13B-206ENST00000496144 TXLNAP40222 546 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 MYL5Q02045 173 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 TBC1D8BQ0IIM8 1120 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 KIAA1841Q6NSI8 718 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 USP38Q8NB14 1042 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 SPATA20Q8TB22 786 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 TCP11Q8WWU5 503 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 SMARCE1Q969G3 411 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 C11orf84Q9BUA3 381 aaPredicted RBP9.46□□□□□ -0.89
VPS13B-206ENST00000496144 SPZ1Q9BXG8 430 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 DACH1Q9UI36 760 aa9.46□□□□□ -0.89
VPS13B-206ENST00000496144 ADAMTS3O15072 1205 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 HBP1O60381 514 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 SMC2O95347 1197 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 ZNF484Q5JVG2 852 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 DNTTIP2Q5QJE6 756 aaKnown RBP9.46□□□□□ -0.9
VPS13B-206ENST00000496144 CELF3Q5SZQ8 465 aaKnown RBP9.46□□□□□ -0.9
VPS13B-206ENST00000496144 ISM2Q6H9L7 571 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 STAG2Q8N3U4 1231 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 XPO4Q9C0E2 1151 aaKnown RBP9.46□□□□□ -0.9
VPS13B-206ENST00000496144 MTUS1Q9ULD2 1270 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 CHMP2AO43633 222 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 CSF2RAP15509 400 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 SFNP31947 248 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 TJAP1Q5JTD0 557 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 ANKRD33Q7Z3H0 272 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 SH3RF1Q7Z6J0 888 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.46□□□□□ -0.9
VPS13B-206ENST00000496144 CCDC150Q8NCX0 1101 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 CCDC47Q96A33 483 aaKnown RBP9.46□□□□□ -0.9
VPS13B-206ENST00000496144 IFNKQ9P0W0 207 aa9.46□□□□□ -0.9
VPS13B-206ENST00000496144 H3BRB1 525 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 CBFA2T2O43439 604 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 SNAI1O95863 264 aaPredicted RBP9.45□□□□□ -0.9
VPS13B-206ENST00000496144 BMP6P22004 513 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 NOVP48745 357 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 FANCCQ00597 558 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 DHX8Q14562 1220 aaKnown RBP9.45□□□□□ -0.9
VPS13B-206ENST00000496144 IL17AQ16552 155 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 PIK3AP1Q6ZUJ8 805 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 RPS6KC1Q96S38 1066 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 TUT1Q9H6E5 874 aaKnown RBP9.45□□□□□ -0.9
VPS13B-206ENST00000496144 JMJD4Q9H9V9 463 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 SSX2IPQ9Y2D8 614 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 TRPV2Q9Y5S1 764 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 CSPG5O95196 566 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 STAT5BP51692 787 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 ZNF174Q15697 407 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms