RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ARVCFO00192 962 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 CKMP06732 381 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 KRT15P19012 456 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 INHBEP58166 350 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 EVA1CP58658 441 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 PURAQ00577 322 aaKnown RBP6.24□□□□□ -1.41
SMC4-224ENST00000494612 GRIN1Q05586 938 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 SPDYAQ5MJ70 313 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 UBE2R2Q712K3 238 aaPredicted RBP6.24□□□□□ -1.41
SMC4-224ENST00000494612 STRA8Q7Z7C7 330 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 RBM12BQ8IXT5 1001 aaKnown RBP6.24□□□□□ -1.41
SMC4-224ENST00000494612 CHAC2Q8WUX2 184 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 FBXW5Q969U6 566 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 WNK4Q96J92 1243 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 MTFR1LQ9H019 292 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 PCDH12Q9NPG4 1184 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 WDR33Q9C0J8 1336 aaKnown RBP6.24□□□□□ -1.41
SMC4-224ENST00000494612 CCDC66A2RUB6 948 aa6.23□□□□□ -1.41
SMC4-224ENST00000494612 GLRX3O76003 335 aaKnown RBP6.23□□□□□ -1.41
SMC4-224ENST00000494612 NAT1P18440 290 aa6.23□□□□□ -1.41
SMC4-224ENST00000494612 IBSPP21815 317 aaPredicted RBP6.23□□□□□ -1.41
SMC4-224ENST00000494612 FLT3P36888 993 aa6.23□□□□□ -1.41
SMC4-224ENST00000494612 AMPD3Q01432 767 aa6.23□□□□□ -1.41
SMC4-224ENST00000494612 SMAD2Q15796 467 aaKnown RBP6.23□□□□□ -1.41
SMC4-224ENST00000494612 HABP4Q5JVS0 413 aaKnown RBP6.23□□□□□ -1.41
SMC4-224ENST00000494612 VASNQ6EMK4 673 aa6.23□□□□□ -1.41
SMC4-224ENST00000494612 ZCCHC8Q6NZY4 707 aaKnown RBP6.23□□□□□ -1.41
SMC4-224ENST00000494612 OTOP3Q7RTS5 596 aa6.23□□□□□ -1.41
SMC4-224ENST00000494612 DDX53Q86TM3 631 aaKnown RBP6.23□□□□□ -1.41
SMC4-224ENST00000494612 OSTM1Q86WC4 334 aa6.23□□□□□ -1.41
SMC4-224ENST00000494612 NXPE1Q8N323 547 aa6.23□□□□□ -1.41
SMC4-224ENST00000494612 CAAP1Q9H8G2 361 aa6.23□□□□□ -1.41
SMC4-224ENST00000494612 INTS7Q9NVH2 962 aaKnown RBP6.23□□□□□ -1.41
SMC4-224ENST00000494612 CBLCQ9ULV8 474 aa6.23□□□□□ -1.41
SMC4-224ENST00000494612 SLC4A7Q9Y6M7 1214 aa6.23□□□□□ -1.41
SMC4-224ENST00000494612 hCG_2014768A0A024R1R8 64 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 KRT37O76014 449 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 GNAT1P11488 350 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 FAHP16930 419 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 CSF2RBP32927 897 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 STAT3P40763 770 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 STRN3Q13033 797 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 TUSC3Q13454 348 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 SEPT7Q16181 437 aaKnown RBP6.22□□□□□ -1.41
SMC4-224ENST00000494612 RNF180Q86T96 592 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 ZNF575Q86XF7 245 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 UHMK1Q8TAS1 419 aaKnown RBP6.22□□□□□ -1.41
SMC4-224ENST00000494612 KATNBL1Q9H079 304 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 KCND1Q9NSA2 647 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 TELO2Q9Y4R8 837 aa6.22□□□□□ -1.41
SMC4-224ENST00000494612 ZNF891A8MT65 544 aaPredicted RBP6.21□□□□□ -1.42
SMC4-224ENST00000494612 NKRFO15226 690 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMC4-224ENST00000494612 FOXS1O43638 330 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 PDE6AP16499 860 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 SOX5P35711 763 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 IGBP1P78318 339 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 SKIDA1Q1XH10 827 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 PAN2Q504Q3 1202 aaKnown RBP6.21□□□□□ -1.42
SMC4-224ENST00000494612 FAM47CQ5HY64 1035 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 TCTN3Q6NUS6 607 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 DDX46Q7L014 1031 aaKnown RBP6.21□□□□□ -1.42
SMC4-224ENST00000494612 C16orf59Q7L2K0 433 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 KRT26Q7Z3Y9 468 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 RALYLQ86SE5 291 aaKnown RBP6.21□□□□□ -1.42
SMC4-224ENST00000494612 AHI1Q8N157 1196 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 GNRHR2Q96P88 292 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 ZFP69BQ9UJL9 534 aa6.21□□□□□ -1.42
SMC4-224ENST00000494612 B4E1Z4 1266 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 NPIPB8E9PQR5 432 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 IL18BPO95998 194 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 LTFP02788 710 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 ENO2P09104 434 aaPredicted RBP6.2□□□□□ -1.42
SMC4-224ENST00000494612 EPHA5P54756 1037 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 JAM2P57087 298 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 ANAPC15P60006 121 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 PFKPQ01813 784 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 CRY1Q16526 586 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 TMEM177Q53S58 311 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 ARHGAP36Q6ZRI8 547 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 PPM1KQ8N3J5 372 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 STPG3Q8N7X2 389 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 C2orf69Q8N8R5 385 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 ZCRB1Q8TBF4 217 aaKnown RBP6.2□□□□□ -1.42
SMC4-224ENST00000494612 PUS7Q96PZ0 661 aaKnown RBP6.2□□□□□ -1.42
SMC4-224ENST00000494612 MAPRE3Q9UPY8 281 aa6.2□□□□□ -1.42
SMC4-224ENST00000494612 TCRBV5S4A2TA0A5A2 114 aa6.19□□□□□ -1.42
SMC4-224ENST00000494612 TRAF5O00463 557 aa6.19□□□□□ -1.42
SMC4-224ENST00000494612 VIL1P09327 827 aaKnown RBP6.19□□□□□ -1.42
SMC4-224ENST00000494612 FAM50AQ14320 339 aaKnown RBP6.19□□□□□ -1.42
SMC4-224ENST00000494612 CD276Q5ZPR3 534 aa6.19□□□□□ -1.42
SMC4-224ENST00000494612 OVCH1Q7RTY7 1134 aa6.19□□□□□ -1.42
SMC4-224ENST00000494612 DDX42Q86XP3 938 aaKnown RBP eCLIP6.19□□□□□ -1.42
SMC4-224ENST00000494612 PTRH1Q86Y79 214 aaKnown RBP6.19□□□□□ -1.42
SMC4-224ENST00000494612 REXO1L1PQ8IX06 675 aa6.19□□□□□ -1.42
SMC4-224ENST00000494612 ATL2Q8NHH9 583 aa6.19□□□□□ -1.42
SMC4-224ENST00000494612 CHFRQ96EP1 664 aa6.19□□□□□ -1.42
SMC4-224ENST00000494612 GPR101Q96P66 508 aaPredicted RBP6.19□□□□□ -1.42
SMC4-224ENST00000494612 CELF4Q9BZC1 486 aaKnown RBP6.19□□□□□ -1.42
SMC4-224ENST00000494612 CD244Q9BZW8 370 aa6.19□□□□□ -1.42
SMC4-224ENST00000494612 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms