RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 ATP5JP18859 108 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 PPARAQ07869 468 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 UTP14CQ5TAP6 766 aaKnown RBP6.82□□□□□ -1.32
SIK3-208ENST00000472648 IER5Q5VY09 327 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 LAIR1Q6GTX8 287 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 KANK3Q6NY19 840 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 DCLRE1AQ6PJP8 1040 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 CABP7Q86V35 215 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 TRIM50Q86XT4 487 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 TMEM57Q8N5G2 664 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 MRPL43Q8N983 215 aaKnown RBP6.82□□□□□ -1.32
SIK3-208ENST00000472648 ZBTB44Q8NCP5 570 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 GPR152Q8TDT2 470 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 RSAD2Q8WXG1 361 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 TBC1D5Q92609 795 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 SHDQ96IW2 340 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 ZNF558Q96NG5 402 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 NAPBQ9H115 298 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 CWH43Q9H720 699 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 SFXN1Q9H9B4 322 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 PADI3Q9ULW8 664 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 TNNQ9UQP3 1299 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 SQORQ9Y6N5 450 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 TDRD15B5MCY1 1934 aaKnown RBP6.82□□□□□ -1.32
SIK3-208ENST00000472648 SHROOM3Q8TF72 1996 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.81□□□□□ -1.32
SIK3-208ENST00000472648 DENND3A2RUS2 1198 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 TMEM8BA6NDV4 472 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 LILRB5O75023 590 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 LRRN2O75325 713 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 CFBP00751 764 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 PDHBP11177 359 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 TOP1P11387 765 aaKnown RBP6.81□□□□□ -1.32
SIK3-208ENST00000472648 EPCAMP16422 314 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 PDE4AP27815 886 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 GBP2P32456 591 aaPredicted RBP6.81□□□□□ -1.32
SIK3-208ENST00000472648 SP2Q02086 613 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 RING1Q06587 406 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 PPFIA1Q13136 1202 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 PTPN14Q15678 1187 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 CDC37Q16543 378 aaPredicted RBP6.81□□□□□ -1.32
SIK3-208ENST00000472648 LETM2Q2VYF4 491 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 FAM102BQ5T8I3 360 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 KCNT2Q6UVM3 1135 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 PRR23CQ6ZRP0 262 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 GPR149Q86SP6 731 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 IFNL3Q8IZI9 196 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 KDF1Q8NAX2 398 aaPredicted RBP6.81□□□□□ -1.32
SIK3-208ENST00000472648 APPBP2Q92624 585 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 GLG1Q92896 1179 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 KIF1BPQ96EK5 621 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 FAM49AQ9H0Q0 323 aaPredicted RBP6.81□□□□□ -1.32
SIK3-208ENST00000472648 SPG21Q9NZD8 308 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 TRPV2Q9Y5S1 764 aa6.81□□□□□ -1.32
SIK3-208ENST00000472648 IGSF9BQ9UPX0 1349 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 SRRM3A6NNA2 597 aaPredicted RBP6.8□□□□□ -1.32
SIK3-208ENST00000472648 PATL2C9JE40 543 aaKnown RBP6.8□□□□□ -1.32
SIK3-208ENST00000472648 FOXD2O60548 495 aaPredicted RBP6.8□□□□□ -1.32
SIK3-208ENST00000472648 CXCL14O95715 111 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 CCND2P30279 289 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 PBX3P40426 434 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 MAGEA9P43362 315 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 RBM25P49756 843 aaKnown RBP6.8□□□□□ -1.32
SIK3-208ENST00000472648 STARD6P59095 220 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 ZNF543Q08ER8 600 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 TMEM62Q0P6H9 643 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 NFX1Q12986 1120 aaKnown RBP6.8□□□□□ -1.32
SIK3-208ENST00000472648 NEDD9Q14511 834 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 UBXN2BQ14CS0 331 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 GRIK4Q16099 956 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 LPAL2Q16609 132 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 GNPTABQ3T906 1256 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 METTL7BQ6UX53 244 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 CYFIP1Q7L576 1253 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 ABI1Q8IZP0 508 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 LRRC43Q8N309 656 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 SLC44A3Q8N4M1 653 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 STAMQ92783 540 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 GPKOWQ92917 476 aaPredicted RBP eCLIP6.8□□□□□ -1.32
SIK3-208ENST00000472648 OSBP2Q969R2 916 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 SMG1Q96Q15 3661 aaKnown RBP6.8□□□□□ -1.32
SIK3-208ENST00000472648 TMEM47Q9BQJ4 181 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 PDCD2LQ9BRP1 358 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 TMX1Q9H3N1 280 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 ATP6V0A4Q9HBG4 840 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 TOMM22Q9NS69 142 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 C1orf112Q9NSG2 853 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 SEMA4GQ9NTN9 838 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 BAZ2BQ9UIF8 2168 aaKnown RBP6.8□□□□□ -1.32
SIK3-208ENST00000472648 MRPL11Q9Y3B7 192 aaKnown RBP6.8□□□□□ -1.32
SIK3-208ENST00000472648 EML5Q05BV3 1969 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 IGSF10Q6WRI0 2623 aa6.8□□□□□ -1.32
SIK3-208ENST00000472648 NAV2Q8IVL1 2488 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 BPTFQ12830 3046 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 NUP205Q92621 2012 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 KANSL1LA0AUZ9 987 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 M0R2C6 588 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 TAF4O00268 1085 aa6.79□□□□□ -1.32
SIK3-208ENST00000472648 HOXA2O43364 376 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms