RNA–Protein interactions for RNA: ENST00000470736.1

UBE4B-207, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-207ENST00000470736 TRAF1Q13077 416 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 ACVR2BQ13705 512 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 EFHC2Q5JST6 749 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 GNASQ5JWF2 1037 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 Q6ZUG5 572 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 DHX32Q7L7V1 743 aaKnown RBP6.19□□□□□ -1.42
UBE4B-207ENST00000470736 RNF180Q86T96 592 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 MCF2L2Q86YR7 1114 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 FBXO16Q8IX29 292 aaPredicted RBP6.19□□□□□ -1.42
UBE4B-207ENST00000470736 DRC7Q8IY82 874 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 KRT222Q8N1A0 295 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 CMTR1Q8N1G2 835 aaKnown RBP6.19□□□□□ -1.42
UBE4B-207ENST00000470736 NSUN7Q8NE18 718 aaKnown RBP6.19□□□□□ -1.42
UBE4B-207ENST00000470736 ZNF397Q8NF99 534 aaPredicted RBP6.19□□□□□ -1.42
UBE4B-207ENST00000470736 BRF1Q92994 677 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 LLPHQ9BRT6 129 aaKnown RBP6.19□□□□□ -1.42
UBE4B-207ENST00000470736 NAT10Q9H0A0 1025 aaKnown RBP6.19□□□□□ -1.42
UBE4B-207ENST00000470736 AP5M1Q9H0R1 490 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 ABHD16BQ9H3Z7 469 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 LY9Q9HBG7 655 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 CBX8Q9HC52 389 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 CYP39A1Q9NYL5 469 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 IMPACTQ9P2X3 320 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 MAD2L2Q9UI95 211 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 OGDHLQ9ULD0 1010 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 PCDHA1Q9Y5I3 950 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 MORC2Q9Y6X9 1032 aaPredicted RBP6.19□□□□□ -1.42
UBE4B-207ENST00000470736 FRMPD3Q5JV73 1810 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 WDR19Q8NEZ3 1342 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 SYNGAP1Q96PV0 1343 aa6.19□□□□□ -1.42
UBE4B-207ENST00000470736 DNAJC25-GNG10A0A024R161 153 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 hCG_1642624A0A1W2PR95 340 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 PALM3A6NDB9 673 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-207ENST00000470736 SHISA8B8ZZ34 492 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 DNM1LO00429 736 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 ZBTB43O43298 467 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 PLEKHA8P1O95397 391 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 SNAI1O95863 264 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-207ENST00000470736 MYCLP12524 364 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-207ENST00000470736 SYN1P17600 705 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 CAPN2P17655 700 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 PTGS1P23219 599 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 HOXA13P31271 388 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-207ENST00000470736 ADCYAP1R1P41586 468 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 ZNF165P49910 485 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 GNAQP50148 359 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 ALDH5A1P51649 535 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-207ENST00000470736 TNFAIP2Q03169 654 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 STX1AQ16623 288 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 RTN1Q16799 776 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 TPD52L1Q16890 204 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-207ENST00000470736 CCDC144BQ3MJ40 725 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 ARHGEF16Q5VV41 709 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 CEP135Q66GS9 1140 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 CCDC186Q7Z3E2 898 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 HEATR3Q7Z4Q2 680 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 FCHSD1Q86WN1 690 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 Q8N3U1 123 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 FBXL16Q8N461 479 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 MSL3Q8N5Y2 521 aaKnown RBP6.18□□□□□ -1.42
UBE4B-207ENST00000470736 FAM133AQ8N9E0 248 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 IGDCC4Q8TDY8 1250 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 CLEC4DQ8WXI8 215 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 CUL5Q93034 780 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 SPATA32Q96LK8 384 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 PCMTD1Q96MG8 357 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-207ENST00000470736 LZTS2Q9BRK4 669 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 TRIM5Q9C035 493 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 TSPYL1Q9H0U9 437 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 PRDM5Q9NQX1 630 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-207ENST00000470736 DACT1Q9NYF0 836 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 PRKAG2Q9UGJ0 569 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 NRBP1Q9UHY1 535 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 RCOR1Q9UKL0 485 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 ZMYND8Q9ULU4 1186 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-207ENST00000470736 ATP11BQ9Y2G3 1177 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 PCDHB11Q9Y5F2 797 aa6.18□□□□□ -1.42
UBE4B-207ENST00000470736 SMCHD1A6NHR9 2005 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 PNMA6FA0A0J9YX94 578 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 H0YGN5 161 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 GCOM1H8Y6P7 765 aaPredicted RBP6.17□□□□□ -1.42
UBE4B-207ENST00000470736 DYNC1LI2O43237 492 aaPredicted RBP6.17□□□□□ -1.42
UBE4B-207ENST00000470736 SORBS3O60504 671 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 POLR2MP0CAP2 368 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 ZNF865P0CJ78 1059 aaPredicted RBP6.17□□□□□ -1.42
UBE4B-207ENST00000470736 EIF2AK2P19525 551 aaKnown RBP6.17□□□□□ -1.42
UBE4B-207ENST00000470736 U2AF2P26368 475 aaKnown RBP eCLIP6.17□□□□□ -1.429e-7■■■□□ 18.3
UBE4B-207ENST00000470736 COL8A1P27658 744 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 LIFRP42702 1097 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 METAP2P50579 478 aaKnown RBP eCLIP6.17□□□□□ -1.42
UBE4B-207ENST00000470736 EVCP57679 992 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 TPM4P67936 248 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 AKAP17AQ02040 695 aaKnown RBP6.17□□□□□ -1.42
UBE4B-207ENST00000470736 APOBRQ0VD83 1088 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 TROAPQ12815 778 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 STK3Q13188 491 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 IQCB1Q15051 598 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 LRRC41Q15345 812 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 PTPN14Q15678 1187 aa6.17□□□□□ -1.42
UBE4B-207ENST00000470736 ANO6Q4KMQ2 910 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms