RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 RETREG2Q8NC44 543 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 IL31RAQ8NI17 732 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 PPTC7Q8NI37 304 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 IGDCC4Q8TDY8 1250 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 EPS8L1Q8TE68 723 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 SLC28A3Q9HAS3 691 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 GTF2IRD1Q9UHL9 959 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 NOD1Q9Y239 953 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 PCDHA11Q9Y5I1 949 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 RBM8AQ9Y5S9 174 aaKnown RBP8.15□□□□□ -1.1
SND1-205ENST00000467238 MUC6Q6W4X9 2439 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 FRMPD4Q14CM0 1322 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 GCOM1H8Y6P7 765 aaPredicted RBP8.14□□□□□ -1.11
SND1-205ENST00000467238 POLR2MP0CAP2 368 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 ZNF286BP0CG31 522 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 TGFB3P10600 412 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 UBA1P22314 1058 aaKnown RBP8.14□□□□□ -1.11
SND1-205ENST00000467238 ABL2P42684 1182 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 CHMP4BP1P59074 171 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 SP2Q02086 613 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 PTK2Q05397 1052 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 DHX9Q08211 1270 aaKnown RBP8.14□□□□□ -1.11
SND1-205ENST00000467238 TRAF1Q13077 416 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 GPNMBQ14956 572 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 DBN1Q16643 649 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 HSDL1Q3SXM5 330 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 TMEM67Q5HYA8 995 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 INTS6LQ5JSJ4 861 aaKnown RBP8.14□□□□□ -1.11
SND1-205ENST00000467238 KCNV1Q6PIU1 500 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 CATIPQ7Z7H3 387 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 DHX37Q8IY37 1157 aaKnown RBP8.14□□□□□ -1.11
SND1-205ENST00000467238 PHOSPHO2Q8TCD6 241 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 AFAP1L1Q8TED9 768 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 DHX38Q92620 1227 aaKnown RBP8.14□□□□□ -1.11
SND1-205ENST00000467238 SLC9A7Q96T83 725 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 MAP3K14Q99558 947 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 KATNAL1Q9BW62 490 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 SPZ1Q9BXG8 430 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 LY9Q9HBG7 655 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 PRDM6Q9NQX0 595 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 HDAC6Q9UBN7 1215 aa8.14□□□□□ -1.11
SND1-205ENST00000467238 RALGAPA2Q2PPJ7 1873 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 PPFIA4O75335 1185 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 DDAH1O94760 285 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 BAIAP3O94812 1187 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 GGPS1O95749 300 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 CA3P07451 260 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 CKBP12277 381 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 SELPP16109 830 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 CCND2P30279 289 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 COL9A3Q14050 684 aaPredicted RBP8.13□□□□□ -1.11
SND1-205ENST00000467238 KIAA0753Q2KHM9 967 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 CELF3Q5SZQ8 465 aaKnown RBP8.13□□□□□ -1.11
SND1-205ENST00000467238 LRRC8DQ7L1W4 858 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 ZBTB33Q86T24 672 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 FCHSD1Q86WN1 690 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 TRIM22Q8IYM9 498 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 ZNF654Q8IZM8 581 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 C7orf31Q8N865 590 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 SPATA33Q96N06 139 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 ALG1Q9BT22 464 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 MTA3Q9BTC8 594 aa8.13□□□□□ -1.11
SND1-205ENST00000467238 FTOQ9C0B1 505 aaKnown RBP eCLIP8.13□□□□□ -1.11
SND1-205ENST00000467238 LSG1Q9H089 658 aaKnown RBP8.13□□□□□ -1.11
SND1-205ENST00000467238 ZDBF2Q9HCK1 2354 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 SH2B2O14492 632 aaPredicted RBP8.12□□□□□ -1.11
SND1-205ENST00000467238 PRC1O43663 620 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 SORBS3O60504 671 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 NBNO60934 754 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 STAM2O75886 525 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 PARNO95453 639 aaKnown RBP8.12□□□□□ -1.11
SND1-205ENST00000467238 CXCL10P02778 98 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 IGFBP4P22692 258 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 SMARCA1P28370 1054 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 ICAM3P32942 547 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 KIF5BP33176 963 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 MRPS9P82933 396 aaKnown RBP8.12□□□□□ -1.11
SND1-205ENST00000467238 ZNF200P98182 395 aaPredicted RBP8.12□□□□□ -1.11
SND1-205ENST00000467238 SEMA3FQ13275 785 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 PTK7Q13308 1070 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 TRIM71Q2Q1W2 868 aaKnown RBP8.12□□□□□ -1.11
SND1-205ENST00000467238 CASC1Q6TDU7 716 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 HERC6Q8IVU3 1022 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 CTCFLQ8NI51 663 aaPredicted RBP8.12□□□□□ -1.11
SND1-205ENST00000467238 ADAM32Q8TC27 787 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 PIBF1Q8WXW3 757 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 PPM1EQ8WY54 764 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 WNT8BQ93098 351 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 TMEM87BQ96K49 555 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 INPP4AQ96PE3 977 aaPredicted RBP8.12□□□□□ -1.11
SND1-205ENST00000467238 ESYT1Q9BSJ8 1104 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 C16orf70Q9BSU1 422 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 MYL10Q9BUA6 226 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 THEGQ9P2T0 379 aa8.12□□□□□ -1.11
SND1-205ENST00000467238 EPOPA6NHQ4 379 aa8.11□□□□□ -1.11
SND1-205ENST00000467238 SPATA31C2B4DYI2 1134 aa8.11□□□□□ -1.11
SND1-205ENST00000467238 KIF28PB7ZC32 967 aa8.11□□□□□ -1.11
SND1-205ENST00000467238 PIK3CDO00329 1044 aa8.11□□□□□ -1.11
SND1-205ENST00000467238 MEIS2O14770 477 aa8.11□□□□□ -1.11
SND1-205ENST00000467238 SLC27A2O14975 620 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms