RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.45□□□□□ -1.38
COPS3-204ENST00000462236 ZFP64Q9NPA5 681 aa6.45□□□□□ -1.38
COPS3-204ENST00000462236 MBNL3Q9NUK0 354 aaKnown RBP6.45□□□□□ -1.38
COPS3-204ENST00000462236 INTS7Q9NVH2 962 aaKnown RBP6.45□□□□□ -1.38
COPS3-204ENST00000462236 WDR33Q9C0J8 1336 aaKnown RBP6.45□□□□□ -1.38
COPS3-204ENST00000462236 SCO2A0A1W2PP80 73 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 H0YIN7 160 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 MYO1BO43795 1136 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 NRDCO43847 1150 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 NPHS1O60500 1241 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 ADAMTS4O75173 837 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 RAC2P15153 192 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 RTP1P59025 263 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 GPR85P60893 370 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 DEFB115Q30KQ5 88 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 ZPBP2Q6X784 338 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 USP53Q70EK8 1073 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 DNAJC10Q8IXB1 793 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 IFNL3Q8IZI9 196 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 FAM177A1Q8N128 213 aaPredicted RBP6.44□□□□□ -1.38
COPS3-204ENST00000462236 ASIC4Q96FT7 647 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 SFMBT1Q9UHJ3 866 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 ZBTB1Q9Y2K1 713 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 PRKAB1Q9Y478 270 aa6.44□□□□□ -1.38
COPS3-204ENST00000462236 COL4A5P29400 1685 aa6.43□□□□□ -1.38
COPS3-204ENST00000462236 RNASE1P07998 156 aaKnown RBP6.43□□□□□ -1.38
COPS3-204ENST00000462236 EIF5P55010 431 aaKnown RBP6.43□□□□□ -1.38
COPS3-204ENST00000462236 GP2P55259 537 aaKnown RBP6.43□□□□□ -1.38
COPS3-204ENST00000462236 SLC14A2Q15849 920 aa6.43□□□□□ -1.38
COPS3-204ENST00000462236 ZNF792Q3KQV3 632 aa6.43□□□□□ -1.38
COPS3-204ENST00000462236 AMOTQ4VCS5 1084 aa6.43□□□□□ -1.38
COPS3-204ENST00000462236 PLEKHO1Q53GL0 409 aaPredicted RBP6.43□□□□□ -1.38
COPS3-204ENST00000462236 ZNF530Q6P9A1 599 aaPredicted RBP6.43□□□□□ -1.38
COPS3-204ENST00000462236 CCDC103Q8IW40 242 aa6.43□□□□□ -1.38
COPS3-204ENST00000462236 NINJ1Q92982 152 aa6.43□□□□□ -1.38
COPS3-204ENST00000462236 BRIP1Q9BX63 1249 aa6.43□□□□□ -1.38
COPS3-204ENST00000462236 TAOK3Q9H2K8 898 aa6.43□□□□□ -1.38
COPS3-204ENST00000462236 EBF1Q9UH73 591 aa6.43□□□□□ -1.38
COPS3-204ENST00000462236 ADGRE2Q9UHX3 823 aa6.43□□□□□ -1.38
COPS3-204ENST00000462236 CTNND2Q9UQB3 1225 aa6.43□□□□□ -1.38
COPS3-204ENST00000462236 TIMM13Q9Y5L4 95 aaPredicted RBP6.43□□□□□ -1.38
COPS3-204ENST00000462236 SZT2Q5T011 3432 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 C7orf72A4D263 438 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 ARNTLO00327 626 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 PPP1R12AO14974 1030 aaPredicted RBP6.42□□□□□ -1.38
COPS3-204ENST00000462236 SRGNP10124 158 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 AFMP43652 599 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 MTHFSP49914 203 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 RPL11P62913 178 aaKnown RBP6.42□□□□□ -1.38
COPS3-204ENST00000462236 PABPC4Q13310 644 aaKnown RBP eCLIP6.42□□□□□ -1.38
COPS3-204ENST00000462236 LAPTM5Q13571 262 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 KIZQ2M2Z5 673 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 PRR5LQ6MZQ0 368 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 LBX2Q6XYB7 198 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 CEP128Q6ZU80 1094 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 CNTROBQ8N137 903 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 RCBTB1Q8NDN9 531 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 PHF20Q9BVI0 1012 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 CRTAC1Q9NQ79 661 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 C19orf73Q9NVV2 129 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 MAGEC2Q9UBF1 373 aaPredicted RBP6.42□□□□□ -1.38
COPS3-204ENST00000462236 TMEFF2Q9UIK5 374 aaPredicted RBP6.42□□□□□ -1.38
COPS3-204ENST00000462236 ADAMTS6Q9UKP5 1117 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 ACSL6Q9UKU0 697 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 TAF6LQ9Y6J9 622 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 ZNF541Q9H0D2 1346 aa6.42□□□□□ -1.38
COPS3-204ENST00000462236 TAF1P21675 1872 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.41□□□□□ -1.38
COPS3-204ENST00000462236 KLRG2A4D1S0 409 aaPredicted RBP6.41□□□□□ -1.38
COPS3-204ENST00000462236 H7BY64 318 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 FZD9O00144 591 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 PPM1GO15355 546 aaPredicted RBP6.41□□□□□ -1.38
COPS3-204ENST00000462236 EPHX2P34913 555 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 PDE6BP35913 854 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 HK2P52789 917 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 GYS2P54840 703 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 LSAMPQ13449 338 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 TKFCQ3LXA3 575 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 HSF5Q4G112 596 aaPredicted RBP6.41□□□□□ -1.38
COPS3-204ENST00000462236 TBC1D9BQ66K14 1250 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 CBLL1Q75N03 491 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 ATG4DQ86TL0 474 aaPredicted RBP6.41□□□□□ -1.38
COPS3-204ENST00000462236 Q8N1Y9 231 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 MAGEB10Q96LZ2 347 aaPredicted RBP6.41□□□□□ -1.38
COPS3-204ENST00000462236 JMJD8Q96S16 334 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 MCOLN1Q9GZU1 580 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 SLC52A2Q9HAB3 445 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 SP110Q9HB58 689 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 RC3H2Q9HBD1 1191 aaKnown RBP6.41□□□□□ -1.38
COPS3-204ENST00000462236 PRDM7Q9NQW5 492 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 DDX21Q9NR30 783 aaKnown RBP eCLIP6.41□□□□□ -1.38
COPS3-204ENST00000462236 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.41□□□□□ -1.382e-10■■■□□ 14.6
COPS3-204ENST00000462236 HACL1Q9UJ83 578 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 LAMB2P55268 1798 aa6.41□□□□□ -1.38
COPS3-204ENST00000462236 RBBP6Q7Z6E9 1792 aaKnown RBP6.41□□□□□ -1.38
COPS3-204ENST00000462236 BRCA2P51587 3418 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 CENPFP49454 3210 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 BLACEA4D250 179 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 NOTOA8MTQ0 251 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 B4E1Z4 1266 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms