RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 PCYT2Q99447 389 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 CUEDC2Q9H467 287 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 HPSEQ9Y251 543 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 COL1A2P08123 1366 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 H3BRB1 525 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 SLITRK3O94933 977 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 OATP04181 439 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 PFKFB1P16118 471 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 CDC25AP30304 524 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 GRB10Q13322 594 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 SPECC1Q5M775 1068 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 POTEGQ6S5H5 508 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 TRIM50Q86XT4 487 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 BBXQ8WY36 941 aaPredicted RBP16.09■□□□□ 0.17
COL5A3-202ENST00000461214 MTG1Q9BT17 334 aaPredicted RBP16.09■□□□□ 0.17
COL5A3-202ENST00000461214 TUT1Q9H6E5 874 aaKnown RBP16.09■□□□□ 0.17
COL5A3-202ENST00000461214 MAGEF1Q9HAY2 307 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 RGL1Q9NZL6 768 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 USP25Q9UHP3 1055 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 PPME1Q9Y570 386 aa16.09■□□□□ 0.17
COL5A3-202ENST00000461214 HAS3O00219 553 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 ZNF862O60290 1169 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 PRPF40AO75400 957 aaKnown RBP16.08■□□□□ 0.16
COL5A3-202ENST00000461214 ASGR1P07306 291 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 MYL3P08590 195 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 XRCC6P12956 609 aaKnown RBP eCLIP16.08■□□□□ 0.16
COL5A3-202ENST00000461214 PLCG1P19174 1290 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 ACLYP53396 1101 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 FAM160A1Q05DH4 1040 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 CTTNQ14247 550 aaKnown RBP16.08■□□□□ 0.16
COL5A3-202ENST00000461214 KARSQ15046 597 aaKnown RBP16.08■□□□□ 0.16
COL5A3-202ENST00000461214 KCNA10Q16322 511 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 XKR3Q5GH77 459 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 UTP14CQ5TAP6 766 aaKnown RBP16.08■□□□□ 0.16
COL5A3-202ENST00000461214 USP49Q70CQ1 688 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 TPH2Q8IWU9 490 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 FSIP1Q8NA03 581 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 ATP8B4Q8TF62 1192 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 NACC1Q96RE7 527 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 UHRF1Q96T88 793 aaPredicted RBP16.08■□□□□ 0.16
COL5A3-202ENST00000461214 SEZ6LQ9BYH1 1024 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 LMBRD1Q9NUN5 540 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 DDX19AQ9NUU7 478 aaKnown RBP16.08■□□□□ 0.16
COL5A3-202ENST00000461214 DBR1Q9UK59 544 aaKnown RBP16.08■□□□□ 0.16
COL5A3-202ENST00000461214 KCNH3Q9ULD8 1083 aa16.08■□□□□ 0.16
COL5A3-202ENST00000461214 YWHABP31946 246 aaKnown RBP16.07■□□□□ 0.16
COL5A3-202ENST00000461214 MCM4P33991 863 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 STAT6P42226 847 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 IRX5P78411 483 aaPredicted RBP16.07■□□□□ 0.16
COL5A3-202ENST00000461214 MFSD10Q14728 455 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 TRIM60Q495X7 471 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 OTUD6AQ7L8S5 288 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 SH3RF1Q7Z6J0 888 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 CKAP2LQ8IYA6 745 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 IQUBQ8NA54 791 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 KAT2BQ92831 832 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 GLT1D1Q96MS3 346 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 PNMA5Q96PV4 448 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 ASB2Q96Q27 587 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 ANKEF1Q9NU02 776 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 WRAP73Q9P2S5 460 aaPredicted RBP16.07■□□□□ 0.16
COL5A3-202ENST00000461214 KIAA1024Q9UPX6 916 aa16.07■□□□□ 0.16
COL5A3-202ENST00000461214 A0A1B0GVL5 298 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 HBP1O60381 514 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 EYA4O95677 639 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 ATP4AP20648 1035 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 SYKP43405 635 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 PSEN2P49810 448 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 PLCB4Q15147 1175 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 E2F4Q16254 413 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 KIAA0753Q2KHM9 967 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 RRAGBQ5VZM2 374 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 CXCL17Q6UXB2 119 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 SLC39A5Q6ZMH5 540 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 ATXN2LQ8WWM7 1075 aaKnown RBP16.06■□□□□ 0.16
COL5A3-202ENST00000461214 CCDC43Q96MW1 224 aaKnown RBP16.06■□□□□ 0.16
COL5A3-202ENST00000461214 NIFKQ9BYG3 293 aaKnown RBP16.06■□□□□ 0.16
COL5A3-202ENST00000461214 GOLPH3LQ9H4A5 285 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 NRBP2Q9NSY0 501 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 THEGQ9P2T0 379 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 SEPT9Q9UHD8 586 aaPredicted RBP16.06■□□□□ 0.16
COL5A3-202ENST00000461214 DNM3Q9UQ16 869 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 TRPC6Q9Y210 931 aa16.06■□□□□ 0.16
COL5A3-202ENST00000461214 A0A087X0B3 334 aa16.05■□□□□ 0.16
COL5A3-202ENST00000461214 A0A1W2PQ45 241 aaPredicted RBP16.05■□□□□ 0.16
COL5A3-202ENST00000461214 A0A1W2PQY0 241 aa16.05■□□□□ 0.16
COL5A3-202ENST00000461214 TRIM43BA6NCK2 446 aa16.05■□□□□ 0.16
COL5A3-202ENST00000461214 GADD45BO75293 160 aaPredicted RBP16.05■□□□□ 0.16
COL5A3-202ENST00000461214 STBD1O95210 358 aa16.05■□□□□ 0.16
COL5A3-202ENST00000461214 MBD3O95983 291 aa16.05■□□□□ 0.16
COL5A3-202ENST00000461214 DNAJB2P25686 324 aa16.05■□□□□ 0.16
COL5A3-202ENST00000461214 MARK3P27448 753 aa16.05■□□□□ 0.16
COL5A3-202ENST00000461214 NDUFA8P51970 172 aa16.05■□□□□ 0.16
COL5A3-202ENST00000461214 PTPN11Q06124 597 aaPredicted RBP16.05■□□□□ 0.16
COL5A3-202ENST00000461214 ZRSR1Q15695 479 aaKnown RBP16.05■□□□□ 0.16
COL5A3-202ENST00000461214 CCDC85BQ15834 202 aaPredicted RBP16.05■□□□□ 0.16
COL5A3-202ENST00000461214 ECM1Q16610 540 aa16.05■□□□□ 0.16
COL5A3-202ENST00000461214 NFRKBQ6P4R8 1299 aa16.05■□□□□ 0.16
COL5A3-202ENST00000461214 ANO5Q75V66 913 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms