RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CETN2P41208 172 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 KIAA1755Q5JYT7 1200 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 NME8Q8N427 588 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 WDR35Q9P2L0 1181 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 TMCC1O94876 653 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 LCA5LO95447 670 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 ECEL1O95672 775 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 GNA11P29992 359 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 CFAP157Q5JU67 520 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 SPATA24Q86W54 205 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 MYLK4Q86YV6 388 aaPredicted RBP5.42□□□□□ -1.54
HERC1-201ENST00000443617 ERMNQ8TAM6 284 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 RHBDL2Q9NX52 303 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 PCDHA4Q9UN74 947 aa5.42□□□□□ -1.54
HERC1-201ENST00000443617 PLEKHA8P1O95397 391 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 HSPA6P17066 643 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 FLT3P36888 993 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 EXOC3L4Q17RC7 722 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 ESCO1Q5FWF5 840 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 GAS8O95995 478 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 BNIP1Q12981 228 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SLC44A4Q53GD3 710 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 RBM41Q96IZ5 413 aaKnown RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 CTNNAL1Q9UBT7 734 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 ASIC3Q9UHC3 531 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SGSM1Q2NKQ1 1148 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 DCAF5Q96JK2 942 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 ARHGEF3Q9NR81 526 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 LMTK2Q8IWU2 1503 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 GYG2O15488 501 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 ABL2P42684 1182 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 COG7P83436 770 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SLC18A3Q16572 532 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 HSP90AA5PQ58FG0 334 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 NEURL4Q96JN8 1562 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 PITPNM2Q9BZ72 1349 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 PXDNLA1KZ92 1463 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 FAM47DPA6NHR8 397 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SNX3O60493 162 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 RNF8O76064 485 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 KRT16P08779 473 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 STAT1P42224 750 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 NAPAP54920 295 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 ARHGEF18Q6ZSZ5 1173 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 RIC8AQ9NPQ8 531 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SIK3Q9Y2K2 1263 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 RBAK-RBAKDNI3L0D1 243 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SHBGP04278 402 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 TCERG1LQ5VWI1 586 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 INPP4AQ96PE3 977 aaPredicted RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 NDNQ99608 321 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 PAIP2BQ9ULR5 123 aaKnown RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 TARSP26639 723 aaKnown RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 SPARCL1Q14515 664 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 RCN1Q15293 331 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 LRRC41Q15345 812 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 RBM26Q5T8P6 1007 aaKnown RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 OCRLQ01968 901 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SHROOM2Q13796 1616 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 FGFR4P22455 802 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 RPL13P26373 211 aaKnown RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 VHLP40337 213 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 CDR2Q01850 454 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 BAP1Q92560 729 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 CCDC28BQ9BUN5 200 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 CELF4Q9BZC1 486 aaKnown RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 SEMA4AQ9H3S1 761 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 AIPL1Q9NZN9 384 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 PPP1R9AQ9ULJ8 1098 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 TRAF3IP3Q9Y228 551 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SPDYE5A6NIY4 337 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 UBTFL6P0CB48 400 aaPredicted RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 ITGA6P23229 1130 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 TMED1Q13445 227 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 MIIPQ5JXC2 388 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 FAM47EQ6ZV65 393 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 NELFCDQ8IXH7 590 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 ENAHQ8N8S7 591 aaPredicted RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 RAB3IL1Q8TBN0 382 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 TBC1D16Q8TBP0 767 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SCG3Q8WXD2 468 aaKnown RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 C6orf50Q9HD87 102 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 CYP39A1Q9NYL5 469 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 TMCO1Q9UM00 188 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 ROBO2Q9HCK4 1378 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 FOXP2O15409 715 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 HNRNPCL1O60812 293 aaKnown RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 ATP9AO75110 1047 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 TROVE2P10155 538 aaKnown RBP eCLIP5.41□□□□□ -1.54
HERC1-201ENST00000443617 SNX30Q5VWJ9 437 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 MAGEB18Q96M61 343 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 MYLK2Q9H1R3 596 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 TMEM59LQ9UK28 342 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SPOPO43791 374 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SKIV2L2P42285 1042 aaKnown RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 PHKA1P46020 1223 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 SCARF1Q14162 830 aa5.41□□□□□ -1.54
HERC1-201ENST00000443617 CCDC97Q96F63 343 aaPredicted RBP5.41□□□□□ -1.54
HERC1-201ENST00000443617 MYOM1P52179 1685 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms