RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 MBOAT7Q96N66 472 aa17.12■□□□□ 0.33
PHF1-204ENST00000427826 NAP1L4Q99733 375 aaKnown RBP17.12■□□□□ 0.33
PHF1-204ENST00000427826 AGO3Q9H9G7 860 aaKnown RBP17.12■□□□□ 0.33
PHF1-204ENST00000427826 SUGCTQ9HAC7 445 aa17.12■□□□□ 0.33
PHF1-204ENST00000427826 ORC3Q9UBD5 711 aaPredicted RBP17.12■□□□□ 0.33
PHF1-204ENST00000427826 KCNJ14Q9UNX9 436 aa17.12■□□□□ 0.33
PHF1-204ENST00000427826 LPXNO60711 386 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 PSMD10O75832 226 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 C22orf31O95567 290 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 TMOD1P28289 359 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 NEK4P51957 841 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 SKIV2LQ15477 1246 aaKnown RBP17.11■□□□□ 0.33
PHF1-204ENST00000427826 AAK1Q2M2I8 961 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 SPRED2Q7Z698 418 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 METTL13Q8N6R0 699 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 GDPD5Q8WTR4 605 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 PRDM6Q9NQX0 595 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 DDX25Q9UHL0 483 aaKnown RBP17.11■□□□□ 0.33
PHF1-204ENST00000427826 PADI3Q9ULW8 664 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 PTPRSQ13332 1948 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 MICAL3Q7RTP6 2002 aa17.11■□□□□ 0.33
PHF1-204ENST00000427826 TRANK1O15050 2925 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 CUL9Q8IWT3 2517 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 CHMP2AO43633 222 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 TDP2O95551 362 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 OATP04181 439 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 GCFC2P16383 781 aaKnown RBP17.1■□□□□ 0.33
PHF1-204ENST00000427826 INF2Q27J81 1249 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 PPP4R3AQ6IN85 833 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 TRMT1LQ7Z2T5 733 aaKnown RBP17.1■□□□□ 0.33
PHF1-204ENST00000427826 MIER3Q7Z3K6 550 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 FIBCD1Q8N539 461 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 IL27Q8NEV9 243 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 GTF3C6Q969F1 213 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 ASB2Q96Q27 587 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 C17orf80Q9BSJ5 609 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 UNC45AQ9H3U1 944 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 BRMS1Q9HCU9 246 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 COG5Q9UP83 839 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 RWDD3Q9Y3V2 267 aa17.1■□□□□ 0.33
PHF1-204ENST00000427826 GPR182O15218 404 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 RPS6KA5O75582 802 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 CTDNEP1O95476 244 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 STAG3L1P0CL83 205 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 CRYBB1P53674 252 aaPredicted RBP17.09■□□□□ 0.33
PHF1-204ENST00000427826 ME3Q16798 604 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 PTPROQ16827 1216 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 LETM2Q2VYF4 491 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 EPC2Q52LR7 807 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 NEK8Q86SG6 692 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 TMEM192Q8IY95 271 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 NECAB1Q8N987 351 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 ETNPPLQ8TBG4 499 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 FAM20AQ96MK3 541 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 MAP7D2Q96T17 732 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 GINS2Q9Y248 185 aa17.09■□□□□ 0.33
PHF1-204ENST00000427826 VCANP13611 3396 aa17.08■□□□□ 0.33
PHF1-204ENST00000427826 RBAK-RBAKDNI3L0D1 243 aa17.08■□□□□ 0.32
PHF1-204ENST00000427826 ZNF862O60290 1169 aa17.08■□□□□ 0.32
PHF1-204ENST00000427826 PRKCEQ02156 737 aa17.08■□□□□ 0.32
PHF1-204ENST00000427826 NFX1Q12986 1120 aaKnown RBP17.08■□□□□ 0.32
PHF1-204ENST00000427826 KRT40Q6A162 431 aa17.08■□□□□ 0.32
PHF1-204ENST00000427826 EFCAB12Q6NXP0 572 aa17.08■□□□□ 0.32
PHF1-204ENST00000427826 B3GNT9Q6UX72 402 aa17.08■□□□□ 0.32
PHF1-204ENST00000427826 NPAS4Q8IUM7 802 aa17.08■□□□□ 0.32
PHF1-204ENST00000427826 COL4A6Q14031 1691 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 SPTBN5Q9NRC6 3674 aaKnown RBP17.07■□□□□ 0.32
PHF1-204ENST00000427826 ADGRA3Q8IWK6 1321 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 H3BNC9 293 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 TBX3O15119 743 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 MARCH6O60337 910 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 CCNT1O60563 726 aaKnown RBP17.07■□□□□ 0.32
PHF1-204ENST00000427826 DGKIO75912 1065 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 SEC24BO95487 1268 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 RB1P06400 928 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 KRT2P35908 639 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 BTG3Q14201 252 aaPredicted RBP17.07■□□□□ 0.32
PHF1-204ENST00000427826 XKR3Q5GH77 459 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 PIK3AP1Q6ZUJ8 805 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 RTN4RL1Q86UN2 441 aaPredicted RBP17.07■□□□□ 0.32
PHF1-204ENST00000427826 GJA10Q969M2 543 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 AKT3Q9Y243 479 aa17.07■□□□□ 0.32
PHF1-204ENST00000427826 NOC2LQ9Y3T9 749 aaKnown RBP17.07■□□□□ 0.32
PHF1-204ENST00000427826 PRRC2BQ5JSZ5 2229 aaKnown RBP17.06■□□□□ 0.32
PHF1-204ENST00000427826 DENND3A2RUS2 1198 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 DKC1O60832 514 aaKnown RBP eCLIP17.06■□□□□ 0.32
PHF1-204ENST00000427826 GPR32O75388 356 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
PHF1-204ENST00000427826 CDC42EP1Q00587 391 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 TBC1D8BQ0IIM8 1120 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 GPM6BQ13491 265 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 TRIM29Q14134 588 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 KIZQ2M2Z5 673 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 NSUN7Q8NE18 718 aaKnown RBP17.06■□□□□ 0.32
PHF1-204ENST00000427826 LINC01599Q8WXQ3 324 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 HLA-CQ95604 372 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 ZNF689Q96CS4 500 aaPredicted RBP17.06■□□□□ 0.32
PHF1-204ENST00000427826 MRPL38Q96DV4 380 aaKnown RBP17.06■□□□□ 0.32
PHF1-204ENST00000427826 NIFKQ9BYG3 293 aaKnown RBP17.06■□□□□ 0.32
PHF1-204ENST00000427826 CDHR5Q9HBB8 845 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms