RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 ITGB3BPQ13352 177 aaPredicted RBP10.43□□□□□ -0.74
HMGB4-201ENST00000425537 HSP90AA2PQ14568 343 aaPredicted RBP10.43□□□□□ -0.74
HMGB4-201ENST00000425537 ARID5BQ14865 1188 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 LRRC41Q15345 812 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 VWA3BQ502W6 1294 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 ZCWPW2Q504Y3 356 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 TREML2Q5T2D2 321 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 SPRYD7Q5W111 196 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 MIS18BP1Q6P0N0 1132 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 PADI6Q6TGC4 694 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 CYP26C1Q6V0L0 522 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 HS2ST1Q7LGA3 356 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 NCAPG2Q86XI2 1143 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 FAM178BQ8IXR5 827 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 TC2NQ8N9U0 490 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 SHCBP1Q8NEM2 672 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 ZNF507Q8TCN5 953 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 PIGOQ8TEQ8 1089 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 ERGIC2Q96RQ1 377 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 RUSC1Q9BVN2 902 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 EDEM3Q9BZQ6 932 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 NUCKS1Q9H1E3 243 aaKnown RBP10.43□□□□□ -0.74
HMGB4-201ENST00000425537 ASCC2Q9H1I8 757 aaPredicted RBP10.43□□□□□ -0.74
HMGB4-201ENST00000425537 NDST4Q9H3R1 872 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 PKD2L1Q9P0L9 805 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 THSD7BQ9C0I4 1608 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 NPHP3-ACAD11A0A0J9YXS1 232 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 A0A1W2PQJ5 194 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 SPATA31C2B4DYI2 1134 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 H0YCG3 227 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 SLC16A3O15427 465 aaKnown RBP10.42□□□□□ -0.74
HMGB4-201ENST00000425537 COBLO75128 1261 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 TGFB3P10600 412 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 TRIM21P19474 475 aaKnown RBP10.42□□□□□ -0.74
HMGB4-201ENST00000425537 CASP14P31944 242 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 YWHABP31946 246 aaKnown RBP10.42□□□□□ -0.74
HMGB4-201ENST00000425537 GTF2A2P52657 109 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 RAD51AP2Q09MP3 1159 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 ADAM9Q13443 819 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 MYBPC2Q14324 1141 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 KCTD2Q14681 263 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 NFIL3Q16649 462 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 ODR4Q5SWX8 454 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 EPM2AIP1Q7L775 607 aaPredicted RBP10.42□□□□□ -0.74
HMGB4-201ENST00000425537 FRMD5Q7Z6J6 570 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 ZC3H3Q8IXZ2 948 aaKnown RBP10.42□□□□□ -0.74
HMGB4-201ENST00000425537 BANK1Q8NDB2 785 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 OR8K1Q8NGG5 319 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 SCFD1Q8WVM8 642 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 HPS3Q969F9 1004 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 KCTD10Q9H3F6 313 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 TMEM206Q9H813 350 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 C17orf75Q9HAS0 396 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 JPH1Q9HDC5 661 aaPredicted RBP10.42□□□□□ -0.74
HMGB4-201ENST00000425537 TBC1D7Q9P0N9 293 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 SLC9A2Q9UBY0 812 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 CAPN11Q9UMQ6 739 aa10.42□□□□□ -0.74
HMGB4-201ENST00000425537 CCL15-CCL14A0A0B4J2E2 113 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 IPO7O95373 1038 aaKnown RBP10.41□□□□□ -0.74
HMGB4-201ENST00000425537 GYPCP04921 128 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 CCDC175P0C221 793 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 EPB41P11171 864 aaKnown RBP10.41□□□□□ -0.74
HMGB4-201ENST00000425537 TNNT1P13805 278 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 FECHP22830 423 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 KRT9P35527 623 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 GCLCP48506 637 aaPredicted RBP10.41□□□□□ -0.74
HMGB4-201ENST00000425537 ALDH5A1P51649 535 aaPredicted RBP10.41□□□□□ -0.74
HMGB4-201ENST00000425537 SMTNP53814 917 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 ADKP55263 362 aaKnown RBP10.41□□□□□ -0.74
HMGB4-201ENST00000425537 ZBED6P86452 979 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 NEDD9Q14511 834 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 CCL15Q16663 113 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 XKR9Q5GH70 373 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 LRRC55Q6ZSA7 311 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 NELFCDQ8IXH7 590 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 TXLNBQ8N3L3 684 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 MCPH1Q8NEM0 835 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 CPLX3Q8WVH0 158 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 KIFAP3Q92845 792 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 HVCN1Q96D96 273 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 PAGR1Q9BTK6 254 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 MKNK1Q9BUB5 465 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 BTBD7Q9P203 1132 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 ARMCX3Q9UH62 379 aaPredicted RBP10.41□□□□□ -0.74
HMGB4-201ENST00000425537 EXOC7Q9UPT5 735 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 PPME1Q9Y570 386 aa10.41□□□□□ -0.74
HMGB4-201ENST00000425537 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.41□□□□□ -0.74
HMGB4-201ENST00000425537 IGF2BP3O00425 579 aaKnown RBP eCLIP10.4□□□□□ -0.74
HMGB4-201ENST00000425537 HIP1RO75146 1068 aa10.4□□□□□ -0.74
HMGB4-201ENST00000425537 PLS3P13797 630 aa10.4□□□□□ -0.74
HMGB4-201ENST00000425537 KCNA2P16389 499 aa10.4□□□□□ -0.74
HMGB4-201ENST00000425537 NR2F2P24468 414 aa10.4□□□□□ -0.74
HMGB4-201ENST00000425537 RARRES1P49788 294 aa10.4□□□□□ -0.74
HMGB4-201ENST00000425537 SYCP1Q15431 976 aa10.4□□□□□ -0.74
HMGB4-201ENST00000425537 XKR3Q5GH77 459 aa10.4□□□□□ -0.74
HMGB4-201ENST00000425537 FAM160B1Q5W0V3 765 aa10.4□□□□□ -0.74
HMGB4-201ENST00000425537 CEP135Q66GS9 1140 aa10.4□□□□□ -0.74
HMGB4-201ENST00000425537 ZNF720Q7Z2F6 126 aa10.4□□□□□ -0.74
HMGB4-201ENST00000425537 FMNL3Q8IVF7 1028 aa10.4□□□□□ -0.74
HMGB4-201ENST00000425537 EXOC8Q8IYI6 725 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms