RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 OPLAHO14841 1288 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 RNF40O75150 1001 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 CAND2O75155 1236 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 WEE2P0C1S8 567 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 TMEM62Q0P6H9 643 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 DUSP6Q16828 381 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 TSR1Q2NL82 804 aaKnown RBP8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 FBXO47Q5MNV8 452 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 ANKRD54Q6NXT1 300 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 KCNV1Q6PIU1 500 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 FCHSD1Q86WN1 690 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 CMTR2Q8IYT2 770 aaKnown RBP8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 USP26Q9BXU7 913 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 MFSD1Q9H3U5 465 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 JMJD4Q9H9V9 463 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 GMPR2Q9P2T1 348 aaKnown RBP8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 DDX19BQ9UMR2 479 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 SORCS3Q9UPU3 1222 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 CCDC171Q6TFL3 1326 aa8.7□□□□□ -1.02
HLA-DQA1-204ENST00000422863 MARK3P27448 753 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 CCND2P30279 289 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 HSD17B4P51659 736 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 IGBP1P78318 339 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 MTMR3Q13615 1198 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 SUZ12Q15022 739 aaKnown RBP8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 GPATCH4Q5T3I0 446 aaKnown RBP8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 FAM102BQ5T8I3 360 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 KANK3Q6NY19 840 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 STOX1Q6ZVD7 989 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 PI4K2BQ8TCG2 481 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 TATDN2Q93075 761 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 TTC14Q96N46 770 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 GPR20Q99678 358 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 FAM49AQ9H0Q0 323 aaPredicted RBP8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 POMKQ9H5K3 350 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 TMEM260Q9NX78 707 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 LIMD1Q9UGP4 676 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 LRFN2Q9ULH4 789 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 PCDHB12Q9Y5F1 795 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 R4GN57 208 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 WDR81Q562E7 1941 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 MYH9P35579 1960 aaKnown RBP8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 ACACBO00763 2458 aa8.69□□□□□ -1.02
HLA-DQA1-204ENST00000422863 LAMA4Q16363 1823 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 DENND4AQ7Z401 1863 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 RALGAPA1Q6GYQ0 2036 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 TBKBP1A7MCY6 615 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 HIDE1A8MVS5 230 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 PPP1R11O60927 126 aaPredicted RBP8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 FGF18O76093 207 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 TGFB3P10600 412 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 MRPS9P82933 396 aaKnown RBP8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 SEMA3FQ13275 785 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 KCNC3Q14003 757 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 ANGPT1Q15389 498 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 ALX1Q15699 326 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 TMEM266Q2M3C6 531 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 MCTP2Q6DN12 878 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 MFSD6Q6ZSS7 791 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 TSHZ1Q6ZSZ6 1077 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 NPAS4Q8IUM7 802 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 TBC1D10CQ8IV04 446 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 UBALD2Q8IYN6 164 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 STAG2Q8N3U4 1231 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 DCLK2Q8N568 766 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 C12orf76Q8N812 135 aaPredicted RBP8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 FAM227BQ96M60 508 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 HINFPQ9BQA5 517 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 KAT14Q9H8E8 782 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 PADI3Q9ULW8 664 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 NR2E1Q9Y466 385 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 CFAP47Q6ZTR5 3102 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 MIA3Q5JRA6 1907 aa8.68□□□□□ -1.02
HLA-DQA1-204ENST00000422863 PARP1P09874 1014 aaKnown RBP8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 STAG3L1P0CL83 205 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 MS4A1P11836 297 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 SCG2P13521 617 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 NEDD4P46934 1319 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 CLCN5P51795 746 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 PRSS12P56730 875 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 MRPS6P82932 125 aaKnown RBP8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 HNRNPUQ00839 825 aaKnown RBP eCLIP8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 PPFIA1Q13136 1202 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 GRIK4Q16099 956 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 CWF19L1Q69YN2 538 aaKnown RBP8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 METTL7BQ6UX53 244 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 RSPH3Q86UC2 560 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 THNSL1Q8IYQ7 743 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 FEZF2Q8TBJ5 459 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 CHD6Q8TD26 2715 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 RIN2Q8WYP3 895 aaPredicted RBP8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 NRCAMQ92823 1304 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 DOCK6Q96HP0 2047 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 AMNQ9BXJ7 453 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 MAF1Q9H063 256 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 ENTPD7Q9NQZ7 604 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 TYW1Q9NV66 732 aaKnown RBP8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 BAHCC1Q9P281 2608 aa8.67□□□□□ -1.02
HLA-DQA1-204ENST00000422863 ZNF215Q9UL58 517 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms