RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 MED24O75448 989 aa16.79■□□□□ 0.28
SEC24D-202ENST00000419654 CYP4A11Q02928 519 aa16.79■□□□□ 0.28
SEC24D-202ENST00000419654 CCDC181Q5TID7 509 aa16.79■□□□□ 0.28
SEC24D-202ENST00000419654 C9orf131Q5VYM1 1079 aa16.79■□□□□ 0.28
SEC24D-202ENST00000419654 PDXDC1Q6P996 788 aa16.79■□□□□ 0.28
SEC24D-202ENST00000419654 TRIM58Q8NG06 486 aa16.79■□□□□ 0.28
SEC24D-202ENST00000419654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.79■□□□□ 0.28
SEC24D-202ENST00000419654 PACSIN1Q9BY11 444 aa16.79■□□□□ 0.28
SEC24D-202ENST00000419654 NT5C3AQ9H0P0 336 aa16.79■□□□□ 0.28
SEC24D-202ENST00000419654 IKZF4Q9H2S9 585 aa16.79■□□□□ 0.28
SEC24D-202ENST00000419654 GOLPH3Q9H4A6 298 aa16.79■□□□□ 0.28
SEC24D-202ENST00000419654 EHMT1Q9H9B1 1298 aa16.79■□□□□ 0.28
SEC24D-202ENST00000419654 FDX1P10109 184 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 PPARDQ03181 441 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 LRRC63Q05C16 580 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 PABPC4Q13310 644 aaKnown RBP eCLIP16.78■□□□□ 0.28
SEC24D-202ENST00000419654 FIGNQ5HY92 759 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 SND1Q7KZF4 910 aaKnown RBP eCLIP16.78■□□□□ 0.286e-7■■■■□ 21.6
SEC24D-202ENST00000419654 JRKLQ9Y4A0 524 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 C19orf81C9J6K1 198 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 USP2O75604 605 aaPredicted RBP16.78■□□□□ 0.28
SEC24D-202ENST00000419654 NOL4O94818 638 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 ZNF76P36508 570 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 TAF3Q5VWG9 929 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 FAM133AQ8N9E0 248 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 RAVER2Q9HCJ3 691 aaKnown RBP16.78■□□□□ 0.28
SEC24D-202ENST00000419654 VAV3Q9UKW4 847 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 RBBP6Q7Z6E9 1792 aaKnown RBP16.78■□□□□ 0.28
SEC24D-202ENST00000419654 PAPPA2Q9BXP8 1791 aa16.78■□□□□ 0.28
SEC24D-202ENST00000419654 ZSCAN5CA6NGD5 496 aaPredicted RBP16.77■□□□□ 0.28
SEC24D-202ENST00000419654 NFIBO00712 420 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 PPP1R2P41236 205 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 FKBP3Q00688 224 aaKnown RBP16.77■□□□□ 0.28
SEC24D-202ENST00000419654 HGSNATQ68CP4 663 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 CCNI2Q6ZMN8 369 aaPredicted RBP16.77■□□□□ 0.28
SEC24D-202ENST00000419654 PROCA1Q8NCQ7 364 aaPredicted RBP16.77■□□□□ 0.28
SEC24D-202ENST00000419654 SPATA4Q8NEY3 305 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 ESYT3A0FGR9 886 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 FGFR1OPO95684 399 aaKnown RBP16.77■□□□□ 0.28
SEC24D-202ENST00000419654 IRX5P78411 483 aaPredicted RBP16.77■□□□□ 0.28
SEC24D-202ENST00000419654 EHHADHQ08426 723 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 MCF2L2Q86YR7 1114 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 SCFD1Q8WVM8 642 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 TSGA10Q9BZW7 698 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 LRRC27Q9C0I9 530 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 BMP2KQ9NSY1 1161 aaPredicted RBP16.77■□□□□ 0.28
SEC24D-202ENST00000419654 ADAMTS1Q9UHI8 967 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 PNMA2Q9UL42 364 aa16.77■□□□□ 0.28
SEC24D-202ENST00000419654 SFI1A8K8P3 1242 aa16.77■□□□□ 0.27
SEC24D-202ENST00000419654 TULP1O00294 542 aaPredicted RBP16.77■□□□□ 0.27
SEC24D-202ENST00000419654 VWA5AO00534 786 aa16.77■□□□□ 0.27
SEC24D-202ENST00000419654 ZBED4O75132 1171 aa16.77■□□□□ 0.27
SEC24D-202ENST00000419654 HMGCS2P54868 508 aa16.77■□□□□ 0.27
SEC24D-202ENST00000419654 TUBB4BP68371 445 aa16.77■□□□□ 0.27
SEC24D-202ENST00000419654 DNAJC21Q5F1R6 531 aaKnown RBP16.77■□□□□ 0.27
SEC24D-202ENST00000419654 TTC19Q6DKK2 380 aaPredicted RBP16.77■□□□□ 0.27
SEC24D-202ENST00000419654 CPXCR1Q8N123 301 aa16.77■□□□□ 0.27
SEC24D-202ENST00000419654 FAM71BQ8TC56 605 aa16.77■□□□□ 0.27
SEC24D-202ENST00000419654 AFG3L2Q9Y4W6 797 aa16.77■□□□□ 0.27
SEC24D-202ENST00000419654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.77■□□□□ 0.27
SEC24D-202ENST00000419654 RPTORQ8N122 1335 aa16.77■□□□□ 0.27
SEC24D-202ENST00000419654 ANO9A1A5B4 782 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 ADAM9Q13443 819 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 COBLL1Q53SF7 1204 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 HAUS3Q68CZ6 603 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 SAMD3Q8N6K7 520 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 DCPSQ96C86 337 aaKnown RBP16.76■□□□□ 0.27
SEC24D-202ENST00000419654 RBM12Q9NTZ6 932 aaKnown RBP16.76■□□□□ 0.27
SEC24D-202ENST00000419654 MAP3K20Q9NYL2 800 aaKnown RBP16.76■□□□□ 0.27
SEC24D-202ENST00000419654 COL20A1Q9P218 1284 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 STK24Q9Y6E0 443 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 RSPH10B2B2RC85 870 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 RSPH10BP0C881 870 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 ALAS1P13196 640 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 CYP11B2P19099 503 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 HNRNPH3P31942 346 aaKnown RBP16.76■□□□□ 0.27
SEC24D-202ENST00000419654 ACTN2P35609 894 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 CDK17Q00537 523 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 ZCWPW2Q504Y3 356 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 CEP55Q53EZ4 464 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 ARSHQ5FYA8 562 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 MUM1L1Q5H9M0 696 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 SFMBT2Q5VUG0 894 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 LEKR1Q6ZMV7 388 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 ATG4CQ96DT6 458 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 ALS2CR12Q96Q35 445 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 TLR10Q9BXR5 811 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 ADAMTS5Q9UNA0 930 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 RABGAP1Q9Y3P9 1069 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 WDR90Q96KV7 1748 aa16.76■□□□□ 0.27
SEC24D-202ENST00000419654 COL11A1P12107 1806 aaPredicted RBP16.75■□□□□ 0.27
SEC24D-202ENST00000419654 TRIM66O15016 1216 aa16.75■□□□□ 0.27
SEC24D-202ENST00000419654 PALMO75781 387 aa16.75■□□□□ 0.27
SEC24D-202ENST00000419654 PRPF6O94906 941 aaKnown RBP16.75■□□□□ 0.27
SEC24D-202ENST00000419654 MAP9Q49MG5 647 aa16.75■□□□□ 0.27
SEC24D-202ENST00000419654 KLHDC7AQ5VTJ3 777 aa16.75■□□□□ 0.27
SEC24D-202ENST00000419654 DLK2Q6UY11 383 aa16.75■□□□□ 0.27
SEC24D-202ENST00000419654 ZNF662Q6ZS27 426 aa16.75■□□□□ 0.27
SEC24D-202ENST00000419654 REPS2Q8NFH8 660 aa16.75■□□□□ 0.27
SEC24D-202ENST00000419654 SLC5A5Q92911 643 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms