RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 NOD1Q9Y239 953 aa8.3□□□□□ -1.08
CXCR4-202ENST00000409817 LUC7L2Q9Y383 392 aaKnown RBP8.3□□□□□ -1.08
CXCR4-202ENST00000409817 PCDHGA11Q9Y5H2 935 aa8.3□□□□□ -1.08
CXCR4-202ENST00000409817 RPTORQ8N122 1335 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 PSMD10O75832 226 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 SSBP05455 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
CXCR4-202ENST00000409817 KRT18P05783 430 aaKnown RBP8.29□□□□□ -1.08
CXCR4-202ENST00000409817 GAP43P17677 238 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 KRT9P35527 623 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 SCNN1AP37088 669 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 FXR1P51114 621 aaKnown RBP eCLIP8.29□□□□□ -1.08
CXCR4-202ENST00000409817 TBC1D8BQ0IIM8 1120 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 R3HDM1Q15032 1099 aaKnown RBP8.29□□□□□ -1.08
CXCR4-202ENST00000409817 ZYXQ15942 572 aaKnown RBP8.29□□□□□ -1.08
CXCR4-202ENST00000409817 EDRF1Q3B7T1 1238 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 ZCWPW2Q504Y3 356 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 LRCH2Q5VUJ6 765 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 OTOP1Q7RTM1 612 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 CREBRFQ8IUR6 639 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 SCYL3Q8IZE3 742 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 DNAJC7Q99615 494 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 HSD17B14Q9BPX1 270 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 GLIS2Q9BZE0 524 aaPredicted RBP8.29□□□□□ -1.08
CXCR4-202ENST00000409817 L2HGDHQ9H9P8 463 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 PPP1R9AQ9ULJ8 1098 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 DOCK1Q14185 1865 aa8.29□□□□□ -1.08
CXCR4-202ENST00000409817 ZNF536O15090 1300 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 FRMPD4Q14CM0 1322 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 LOXHD1Q8IVV2 1947 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 SHTN1A0MZ66 631 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 C19orf81C9J6K1 198 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 GAS7O60861 476 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 COBLO75128 1261 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 ZBED4O75132 1171 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 INPP5BP32019 993 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 STAT3P40763 770 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 PRELPP51888 382 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 OAZ1P54368 228 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 MARSP56192 900 aaKnown RBP8.28□□□□□ -1.08
CXCR4-202ENST00000409817 EPHA7Q15375 998 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 VWA3BQ502W6 1294 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 HERC4Q5GLZ8 1057 aaPredicted RBP8.28□□□□□ -1.08
CXCR4-202ENST00000409817 XRRA1Q6P2D8 792 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 TRIM50Q86XT4 487 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 GPC2Q8N158 579 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 ZNF397Q8NF99 534 aaPredicted RBP8.28□□□□□ -1.08
CXCR4-202ENST00000409817 CPLX3Q8WVH0 158 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 GJA10Q969M2 543 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 C12orf42Q96LP6 360 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 EIF2AK1Q9BQI3 630 aaKnown RBP8.28□□□□□ -1.08
CXCR4-202ENST00000409817 MXRA8Q9BRK3 442 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 EDEM3Q9BZQ6 932 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 PICK1Q9NRD5 415 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 FBXO28Q9NVF7 368 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 CTDP1Q9Y5B0 961 aaPredicted RBP8.28□□□□□ -1.08
CXCR4-202ENST00000409817 PCDHA2Q9Y5H9 948 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 COL4A3BPQ9Y5P4 624 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 GJA3Q9Y6H8 435 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 B4DLN1 442 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 RNF223E7ERA6 249 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 PES1O00541 588 aaKnown RBP8.28□□□□□ -1.08
CXCR4-202ENST00000409817 EGFRP00533 1210 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 VCAM1P19320 739 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 TRIM21P19474 475 aaKnown RBP8.28□□□□□ -1.08
CXCR4-202ENST00000409817 BACE1P56817 501 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 ZBED6P86452 979 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 CDK17Q00537 523 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 RASSF7Q02833 373 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 PPP2R3AQ06190 1150 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 GOLGA8FQ08AF8 430 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 GOLGA8DPQ0D2H9 430 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 GIT2Q14161 759 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 PTPN21Q16825 1174 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 SWI5Q1ZZU3 235 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 TBC1D10BQ4KMP7 808 aaPredicted RBP8.28□□□□□ -1.08
CXCR4-202ENST00000409817 MIIPQ5JXC2 388 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 PCNX4Q63HM2 1172 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 TRIM65Q6PJ69 517 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 B3GNT9Q6UX72 402 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 LRRC55Q6ZSA7 311 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 ZC3H3Q8IXZ2 948 aaKnown RBP8.28□□□□□ -1.08
CXCR4-202ENST00000409817 ZNF280CQ8ND82 737 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 NACC1Q96RE7 527 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 ZNF577Q9BSK1 485 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 TEKT3Q9BXF9 490 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 TANGO6Q9C0B7 1094 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 TTYH3Q9C0H2 523 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 NDST4Q9H3R1 872 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 OLFML3Q9NRN5 406 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 ZNHIT6Q9NWK9 470 aaKnown RBP8.28□□□□□ -1.08
CXCR4-202ENST00000409817 MYO1AQ9UBC5 1043 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 SEL1LQ9UBV2 794 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 FAM184BQ9ULE4 1060 aa8.28□□□□□ -1.08
CXCR4-202ENST00000409817 MYPNQ86TC9 1320 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 RBBP6Q7Z6E9 1792 aaKnown RBP8.27□□□□□ -1.09
CXCR4-202ENST00000409817 DICER1Q9UPY3 1922 aaKnown RBP8.27□□□□□ -1.09
CXCR4-202ENST00000409817 TTC26A0AVF1 554 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 SOWAHDA6NJG2 315 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 IPO5O00410 1097 aaKnown RBP8.27□□□□□ -1.09
CXCR4-202ENST00000409817 TBCAO75347 108 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms