RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 ARHGAP27Q6ZUM4 889 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 OTOP1Q7RTM1 612 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 PRPF38AQ8NAV1 312 aaKnown RBP12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 COG1Q8WTW3 980 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 CALCOCO1Q9P1Z2 691 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 PIK3CDO00329 1044 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 ZNF263O14978 683 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 SLC16A3O15427 465 aaKnown RBP12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 CEP104O60308 925 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 HSF2BPO75031 334 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 H2AFZP0C0S5 128 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 ARP10275 920 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 FERP16591 822 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 ARHGEF16Q5VV41 709 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 ALKBH5Q6P6C2 394 aaKnown RBP12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 H2AFVQ71UI9 128 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 MBOAT7Q96N66 472 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 PCIF1Q9H4Z3 704 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 TRAF3IP3Q9Y228 551 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 AKAP3O75969 853 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 CASP4P49662 377 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 C10orf76Q5T2E6 689 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 KLHL7Q8IXQ5 586 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 UNC45AQ9H3U1 944 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 SEL1LQ9UBV2 794 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 SYNPO2Q9UMS6 1093 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 FAN1Q9Y2M0 1017 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 SLITRK3O94933 977 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 MYL7Q01449 175 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 MAPK8IP2Q13387 824 aaPredicted RBP12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 PADI6Q6TGC4 694 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 PEX26Q7Z412 305 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 FMNL3Q8IVF7 1028 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 IFT20Q8IY31 132 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 SPATA4Q8NEY3 305 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 CTNNBL1Q8WYA6 563 aaPredicted RBP12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 WDR18Q9BV38 432 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 TARSL2A2RTX5 802 aaKnown RBP12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 GOLGA6BA6NDN3 693 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 ZBTB39O15060 712 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 RASA3Q14644 834 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 TBC1D10BQ4KMP7 808 aaPredicted RBP12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 KCTD17Q8N5Z5 321 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 FAM71BQ8TC56 605 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 SMARCAL1Q9NZC9 954 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 VAV3Q9UKW4 847 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 PACSIN2Q9UNF0 486 aaPredicted RBP12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 ATRNL1Q5VV63 1379 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 ABCB4P21439 1286 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 FAM102BQ5T8I3 360 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 KLHDC7AQ5VTJ3 777 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 MED4Q9NPJ6 270 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 PICK1Q9NRD5 415 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 L1RE1Q9UN81 338 aa12.62□□□□□ -0.39
PDXDC1-202ENST00000396410 A0A087X0T9 212 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 HIP1RO75146 1068 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 VIL1P09327 827 aaKnown RBP12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 FAM228BP0C875 321 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 POLD1P28340 1107 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 MTMR1Q13613 665 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 NBPF9Q3BBW0 867 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 XKR9Q5GH70 373 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 WDR93Q6P2C0 686 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 MXRA8Q9BRK3 442 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 PIM2Q9P1W9 311 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 EIF3DO15371 548 aaKnown RBP eCLIP12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 KLRC1P26715 233 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 SMTNP53814 917 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 PTK2Q05397 1052 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 DAAM2Q86T65 1068 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 AGBL3Q8NEM8 1001 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 LENG9Q96B70 501 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 BICD1Q96G01 975 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 RANBP17Q9H2T7 1088 aaKnown RBP12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.61□□□□□ -0.393e-8■■■■■ 123.5
PDXDC1-202ENST00000396410 BCRP11274 1271 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 PON1P27169 355 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 SPIRE1Q08AE8 756 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 KCNA1Q09470 495 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 P2RX7Q99572 595 aaKnown RBP12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 LRRC1Q9BTT6 524 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 CENPHQ9H3R5 247 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 RNF14Q9UBS8 474 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 PCDHA2Q9Y5H9 948 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 MYH4Q9Y623 1939 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 P4HBP07237 508 aaKnown RBP12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 TAF3Q5VWG9 929 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 MS4A14Q96JA4 679 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 KRT12Q99456 494 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 GLIS2Q9BZE0 524 aaPredicted RBP12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 EHD2Q9NZN4 543 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 ADAM21Q9UKJ8 722 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 ODF2LQ9ULJ1 636 aa12.61□□□□□ -0.39
PDXDC1-202ENST00000396410 TRIM49P0CI25 452 aa12.6□□□□□ -0.39
PDXDC1-202ENST00000396410 TRIM49CP0CI26 452 aa12.6□□□□□ -0.39
PDXDC1-202ENST00000396410 NAB2Q15742 525 aa12.6□□□□□ -0.39
PDXDC1-202ENST00000396410 SYCE1Q8N0S2 351 aa12.6□□□□□ -0.39
PDXDC1-202ENST00000396410 NEK9Q8TD19 979 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms