RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ABHD15Q6UXT9 468 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 CCDC155Q8N6L0 562 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 ADAMTS19Q8TE59 1207 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 SLC5A5Q92911 643 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 TNFRSF25Q93038 417 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 SCLYQ96I15 445 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 MBOAT7Q96N66 472 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 CTAGE1Q96RT6 745 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 PCYT2Q99447 389 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 RIT2Q99578 217 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.43□□□□□ -0.744e-7■■■□□ 15.1
HMGN1-202ENST00000380747 PBX4Q9BYU1 374 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 RNPEPQ9H4A4 650 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 ZNF302Q9NR11 478 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 SETD4Q9NVD3 440 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 MYO9BQ13459 2157 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 SCN10AQ9Y5Y9 1956 aa10.43□□□□□ -0.74
HMGN1-202ENST00000380747 WDR64B1ANS9 1081 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 TREHO43280 583 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 ATG7O95352 703 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 PSAPP07602 524 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 CSF2RAP15509 400 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 GJB2P29033 226 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 CLCN1P35523 988 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 IGBP1P78318 339 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 PPFIA1Q13136 1202 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 PTK7Q13308 1070 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 RAB30Q15771 203 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 TMEM240Q5SV17 173 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 PPP4R3AQ6IN85 833 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 SWSAP1Q6NVH7 229 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 PDXDC2PQ6P474 469 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 PSRC1Q6PGN9 363 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-202ENST00000380747 C16orf59Q7L2K0 433 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 PLPPR4Q7Z2D5 763 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 CKAP2LQ8IYA6 745 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 SMAP1Q8IYB5 467 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-202ENST00000380747 FBXO18Q8NFZ0 1043 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 ETNPPLQ8TBG4 499 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 LMBR1Q8WVP7 490 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 DHX38Q92620 1227 aaKnown RBP10.42□□□□□ -0.74
HMGN1-202ENST00000380747 ATP6V0A1Q93050 837 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 KCNK17Q96T54 332 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 UHRF1Q96T88 793 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-202ENST00000380747 TMUB1Q9BVT8 246 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 WNT8AQ9H1J5 351 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 UNC45AQ9H3U1 944 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 GABBR1Q9UBS5 961 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-202ENST00000380747 PCDHA10Q9Y5I2 948 aa10.42□□□□□ -0.74
HMGN1-202ENST00000380747 NRCAMQ92823 1304 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 H3BQV1 296 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 BAG4O95429 457 aaKnown RBP10.41□□□□□ -0.74
HMGN1-202ENST00000380747 ACRP10323 421 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 JAK3P52333 1124 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 PLCB4Q15147 1175 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 GRIK4Q16099 956 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 LRRC8DQ7L1W4 858 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 TRMT1LQ7Z2T5 733 aaKnown RBP10.41□□□□□ -0.74
HMGN1-202ENST00000380747 MIER3Q7Z3K6 550 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 CCDC60Q8IWA6 550 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-202ENST00000380747 CAGE1Q8TC20 777 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 TNPO1Q92973 898 aaKnown RBP10.41□□□□□ -0.74
HMGN1-202ENST00000380747 FAM20AQ96MK3 541 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 FOXP1Q9H334 677 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-202ENST00000380747 IL23AQ9NPF7 189 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 DISC1Q9NRI5 854 aa10.41□□□□□ -0.74
HMGN1-202ENST00000380747 IGKV6D-21A0A0A0MT36 114 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 POTEB3A0JP26 581 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 KIF28PB7ZC32 967 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 PSMD10O75832 226 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 IQCF3P0C7M6 154 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 CKBP12277 381 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 INSRRP14616 1297 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 SELPP16109 830 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 HOXC8P31273 242 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 SFNP31947 248 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 THPOP40225 353 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 PBX2P40425 430 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 SLC26A2P50443 739 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 ADGRE1Q14246 886 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 CALCRLQ16602 461 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 MCTP1Q6DN14 999 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 POTEBQ6S5H4 581 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 DEFB128Q7Z7B8 93 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 SERINC5Q86VE9 423 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 RPUSD2Q8IZ73 545 aaKnown RBP10.4□□□□□ -0.74
HMGN1-202ENST00000380747 AFAP1L1Q8TED9 768 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 TRAPPC12Q8WVT3 735 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 HERVK_113Q902F9 699 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 WNT8BQ93098 351 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 FAM122AQ96E09 287 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 C1QTNF1Q9BXJ1 281 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 FTOQ9C0B1 505 aaKnown RBP eCLIP10.4□□□□□ -0.747e-6■■□□□ 12.9
HMGN1-202ENST00000380747 PRDM12Q9H4Q4 367 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 KCNMB3Q9NPA1 279 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 CXXC1Q9P0U4 656 aaPredicted RBP10.4□□□□□ -0.74
HMGN1-202ENST00000380747 RAPGEFL1Q9UHV5 662 aa10.4□□□□□ -0.74
HMGN1-202ENST00000380747 NOL7Q9UMY1 257 aaKnown RBP10.4□□□□□ -0.74
HMGN1-202ENST00000380747 RRN3P2A6NIE6 340 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms