RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 SNX12Q9UMY4 172 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 SLC26A4O43511 780 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 OPA1O60313 960 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 CFBP00751 764 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 MARSP56192 900 aaKnown RBP18.76■□□□□ 0.59
TRIM27-201ENST00000377194 NEDD9Q14511 834 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 ERMNQ8TAM6 284 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 ZNF70Q9UC06 446 aaPredicted RBP18.76■□□□□ 0.59
TRIM27-201ENST00000377194 TMX2Q9Y320 296 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.76■□□□□ 0.598e-6■■□□□ 13.6
TRIM27-201ENST00000377194 MYH10P35580 1976 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 CCDC189A1A4V9 331 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 PIK3CDO00329 1044 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 ZNF76P36508 570 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 RSBN1LQ6PCB5 846 aaPredicted RBP18.75■□□□□ 0.59
TRIM27-201ENST00000377194 CEP57Q86XR8 500 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 ZC3H3Q8IXZ2 948 aaKnown RBP18.75■□□□□ 0.59
TRIM27-201ENST00000377194 ANKRD13CQ8N6S4 541 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 RNPC3Q96LT9 517 aaKnown RBP18.75■□□□□ 0.59
TRIM27-201ENST00000377194 WDR18Q9BV38 432 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 RUSC1Q9BVN2 902 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 SH2D4AQ9H788 454 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 CHUKO15111 745 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 CYP3A4P08684 503 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 MYBP10242 640 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 NF2P35240 595 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 POLR2FP61218 127 aaKnown RBP18.75■□□□□ 0.59
TRIM27-201ENST00000377194 UBXN2AP68543 259 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 NAA35Q5VZE5 725 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 CCDC174Q6PII3 467 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 MIGA2Q7L4E1 593 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 SPATA4Q8NEY3 305 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 EIF2AK1Q9BQI3 630 aaKnown RBP18.75■□□□□ 0.59
TRIM27-201ENST00000377194 LSM14BQ9BX40 385 aaKnown RBP18.75■□□□□ 0.59
TRIM27-201ENST00000377194 KLC4Q9NSK0 619 aa18.75■□□□□ 0.59
TRIM27-201ENST00000377194 CNTNAP1P78357 1384 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 ZBTB39O15060 712 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 MOCS3O95396 460 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 NR2F2P24468 414 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 CXCR5P32302 372 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 IFT88Q13099 833 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 ZYXQ15942 572 aaKnown RBP18.74■□□□□ 0.59
TRIM27-201ENST00000377194 KIRREL3Q8IZU9 778 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 GMLQ99445 158 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 SFI1A8K8P3 1242 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 GNA14O95837 355 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 NAP1L1P55209 391 aaKnown RBP18.74■□□□□ 0.59
TRIM27-201ENST00000377194 EN1Q05925 392 aaPredicted RBP18.74■□□□□ 0.59
TRIM27-201ENST00000377194 KCNA1Q09470 495 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 NNTQ13423 1086 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 EPM2AIP1Q7L775 607 aaPredicted RBP18.74■□□□□ 0.59
TRIM27-201ENST00000377194 SUPT20HQ8NEM7 779 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 PIGOQ8TEQ8 1089 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 ZIM3Q96PE6 472 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 EDEM3Q9BZQ6 932 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 ZNF277Q9NRM2 450 aaPredicted RBP18.74■□□□□ 0.59
TRIM27-201ENST00000377194 TMOD2Q9NZR1 351 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 CEP72Q9P209 647 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 ODF2LQ9ULJ1 636 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 ZBTB21Q9ULJ3 1066 aa18.74■□□□□ 0.59
TRIM27-201ENST00000377194 COL2A1P02458 1487 aaPredicted RBP18.73■□□□□ 0.59
TRIM27-201ENST00000377194 HSF2BPO75031 334 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 PAX7P23759 505 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 LSP1P33241 339 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 SKOR1P84550 965 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 SF3B2Q13435 895 aaKnown RBP18.73■□□□□ 0.59
TRIM27-201ENST00000377194 CTTNQ14247 550 aaKnown RBP18.73■□□□□ 0.59
TRIM27-201ENST00000377194 EDRF1Q3B7T1 1238 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 SAMD1Q6SPF0 538 aaPredicted RBP18.73■□□□□ 0.59
TRIM27-201ENST00000377194 FAM151AQ8WW52 585 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
TRIM27-201ENST00000377194 TSGA10Q9BZW7 698 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 TMEM39BQ9GZU3 492 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 SLC24A3Q9HC58 644 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 ARHGEF10LQ9HCE6 1279 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 A1CFQ9NQ94 594 aaKnown RBP18.73■□□□□ 0.59
TRIM27-201ENST00000377194 USO1O60763 962 aaKnown RBP18.73■□□□□ 0.59
TRIM27-201ENST00000377194 MAGEA1P43355 309 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 KCNH2Q12809 1159 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 DLGAP5Q15398 846 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 KNOP1Q1ED39 458 aaKnown RBP18.73■□□□□ 0.59
TRIM27-201ENST00000377194 OTOP1Q7RTM1 612 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 CCDC13Q8IYE1 715 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 MIEF2Q96C03 454 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 HSD17B14Q9BPX1 270 aa18.73■□□□□ 0.59
TRIM27-201ENST00000377194 COL4A5P29400 1685 aa18.72■□□□□ 0.59
TRIM27-201ENST00000377194 CETN3O15182 167 aa18.72■□□□□ 0.59
TRIM27-201ENST00000377194 EPB41P11171 864 aaKnown RBP18.72■□□□□ 0.59
TRIM27-201ENST00000377194 EPHB4P54760 987 aa18.72■□□□□ 0.59
TRIM27-201ENST00000377194 TDRD12Q587J7 1177 aaKnown RBP18.72■□□□□ 0.59
TRIM27-201ENST00000377194 NFRKBQ6P4R8 1299 aa18.72■□□□□ 0.59
TRIM27-201ENST00000377194 ZNF473Q8WTR7 871 aaKnown RBP18.72■□□□□ 0.59
TRIM27-201ENST00000377194 IKZF4Q9H2S9 585 aa18.72■□□□□ 0.59
TRIM27-201ENST00000377194 VEZTQ9HBM0 779 aa18.72■□□□□ 0.59
TRIM27-201ENST00000377194 FBXO28Q9NVF7 368 aa18.72■□□□□ 0.59
TRIM27-201ENST00000377194 TRAF3IP3Q9Y228 551 aa18.72■□□□□ 0.59
TRIM27-201ENST00000377194 VIL1P09327 827 aaKnown RBP18.72■□□□□ 0.59
TRIM27-201ENST00000377194 RASSF7Q02833 373 aa18.72■□□□□ 0.59
TRIM27-201ENST00000377194 PREPLQ4J6C6 727 aaPredicted RBP18.72■□□□□ 0.59
TRIM27-201ENST00000377194 TRIM58Q8NG06 486 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms