RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 IFIH1Q9BYX4 1025 aaKnown RBP13.24□□□□□ -0.29
C9orf3-203ENST00000375315 PCDHB6Q9Y5E3 794 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 MMP1P03956 469 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 PYGLP06737 847 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 PTGER2P43116 358 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 PRELPP51888 382 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 ZBED6P86452 979 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 PPARDQ03181 441 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 ITIH4Q14624 930 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 SLC35G1Q2M3R5 365 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 MTHFD1LQ6UB35 978 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 ZNF513Q8N8E2 541 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-203ENST00000375315 CASKIN2Q8WXE0 1202 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 FAM167BQ9BTA0 163 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-203ENST00000375315 CNOT10Q9H9A5 744 aaKnown RBP13.24□□□□□ -0.29
C9orf3-203ENST00000375315 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.24□□□□□ -0.298e-8■■■■■ 32.8
C9orf3-203ENST00000375315 ZNF70Q9UC06 446 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-203ENST00000375315 MAD2L2Q9UI95 211 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 SUGT1Q9Y2Z0 365 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 SPDYE3A6NKU9 549 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 WNT7AO00755 349 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 PPFIA2O75334 1257 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 XBP1P17861 261 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 CTNNA1P35221 906 aaKnown RBP13.23□□□□□ -0.29
C9orf3-203ENST00000375315 DNM2P50570 870 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 MXRA7P84157 204 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 HLTFQ14527 1009 aaKnown RBP eCLIP13.23□□□□□ -0.29
C9orf3-203ENST00000375315 TAF11Q15544 211 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 ARMC3Q5W041 872 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 SPATA21Q7Z572 469 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 ARHGAP22Q7Z5H3 698 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 ZNF526Q8TF50 670 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-203ENST00000375315 MLXIPQ9HAP2 919 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 MTMR4Q9NYA4 1195 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 MAGEC2Q9UBF1 373 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-203ENST00000375315 PI4KBQ9UBF8 816 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 SERPINA10Q9UK55 444 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 ZSCAN5CA6NGD5 496 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-203ENST00000375315 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 DDAH1O94760 285 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 CALM1P0DP23 149 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 CALM2P0DP24 149 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 CALM3P0DP25 149 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 PCP11498 1178 aaKnown RBP13.23□□□□□ -0.29
C9orf3-203ENST00000375315 NQO1P15559 274 aaKnown RBP13.23□□□□□ -0.29
C9orf3-203ENST00000375315 ANKRD20A2Q5SQ80 823 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 ANKRD20A1Q5TYW2 823 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 ANKRD20A3Q5VUR7 823 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 TYW1BQ6NUM6 668 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 CNTNAP5Q8WYK1 1306 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 STK36Q9NRP7 1315 aa13.23□□□□□ -0.29
C9orf3-203ENST00000375315 SCG2P13521 617 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 EEF2P13639 858 aaKnown RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 ATP2A2P16615 1042 aaKnown RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 RANBP1P43487 201 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 GMPSP49915 693 aaPredicted RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 CDK17Q00537 523 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 FUT2Q10981 343 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 RRP1BQ14684 758 aaKnown RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 NOVA2Q9UNW9 492 aaKnown RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 COL4A5P29400 1685 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 WNT10BO00744 389 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 ABLIM1O14639 778 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 EVI5O60447 810 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 EEF1GP26641 437 aaKnown RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 HSD17B3P37058 310 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 PDIA5Q14554 519 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 TEKT4Q8WW24 435 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 EPAS1Q99814 870 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 SAMD15Q9P1V8 674 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 A0A087X0B3 334 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 VIL1P09327 827 aaKnown RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 MCM7P33993 719 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 NAPAP54920 295 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 LRRC23Q53EV4 343 aaPredicted RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 LMNTD2Q8IXW0 634 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 EIF1ADQ8N9N8 165 aaKnown RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 FAM81AQ8TBF8 368 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 NAF1Q96HR8 494 aaKnown RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 EPSTI1Q96J88 318 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
C9orf3-203ENST00000375315 SPON1Q9HCB6 807 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 AGPAT5Q9NUQ2 364 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 RMND1Q9NWS8 449 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
C9orf3-203ENST00000375315 PRPF3O43395 683 aaKnown RBP13.21□□□□□ -0.29
C9orf3-203ENST00000375315 CNGA1P29973 690 aa13.21□□□□□ -0.29
C9orf3-203ENST00000375315 ABL2P42684 1182 aa13.21□□□□□ -0.29
C9orf3-203ENST00000375315 ECE1P42892 770 aa13.21□□□□□ -0.29
C9orf3-203ENST00000375315 GABPAQ06546 454 aa13.21□□□□□ -0.29
C9orf3-203ENST00000375315 ZNF844Q08AG5 666 aa13.21□□□□□ -0.29
C9orf3-203ENST00000375315 MTMR3Q13615 1198 aa13.21□□□□□ -0.29
C9orf3-203ENST00000375315 CUL3Q13618 768 aa13.21□□□□□ -0.29
C9orf3-203ENST00000375315 ABCB5Q2M3G0 1257 aa13.21□□□□□ -0.29
C9orf3-203ENST00000375315 FAM133BQ5BKY9 247 aaKnown RBP13.21□□□□□ -0.29
C9orf3-203ENST00000375315 ZNF507Q8TCN5 953 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms