RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 KRT27Q7Z3Y8 459 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 CCDC82Q8N4S0 544 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 SLC17A8Q8NDX2 589 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 MRRFQ96E11 262 aaKnown RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 DSEQ9UL01 958 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 PNMA2Q9UL42 364 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 IVNS1ABPQ9Y6Y0 642 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 PCP4L1A6NKN8 68 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 PRPF6O94906 941 aaKnown RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 HOXB7P09629 217 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 ATP6V1B1P15313 513 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 ATP1A4Q13733 1029 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 ASIC2Q16515 512 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 MCMDC2Q4G0Z9 681 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 OTUD6AQ7L8S5 288 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 HEATR3Q7Z4Q2 680 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 CATSPER1Q8NEC5 780 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 GIPC3Q8TF64 312 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 TRIM56Q9BRZ2 755 aaKnown RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 ADCY10Q96PN6 1610 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 GRID2IPA4D2P6 1211 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 GOLGA8IPA6NC78 632 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 KPNA4O00629 521 aaPredicted RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 CNOT3O75175 753 aaKnown RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 GUCY1B2O75343 617 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 SPARCL1Q14515 664 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 TERB1Q8NA31 727 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 DHRS1Q96LJ7 313 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 SELENONQ9NZV5 590 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 MAPK8IP1Q9UQF2 711 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 CAB39Q9Y376 341 aaPredicted RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 TMEM247A6NEH6 219 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 TAF4O00268 1085 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 CTNNA2P26232 953 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 PLCB3Q01970 1234 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 STK4Q13043 487 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 LRRC14Q15048 493 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 TRAPPC11Q7Z392 1133 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 FNBP1Q96RU3 617 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 MAN1B1Q9UKM7 699 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 ARHGAP31Q2M1Z3 1444 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 ZBTB43O43298 467 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 KRT6CP48668 564 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 ASIC1P78348 528 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 CYP27A1Q02318 531 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 SLC34A1Q06495 639 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 KLHL30Q0D2K2 578 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 ITGA9Q13797 1035 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 TBC1D5Q92609 795 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 TUBGCP5Q96RT8 1024 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 PAIP1Q9H074 479 aaKnown RBP11.17□□□□□ -0.62
PRDM1-201ENST00000369089 SYNPO2Q9UMS6 1093 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 EFCAB6Q5THR3 1501 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 ABCC4O15439 1325 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 ERBB3P21860 1342 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 ETS2P15036 469 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 CDH3P22223 829 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 SLC39A14Q15043 492 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 CNGA3Q16281 694 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 C6orf183Q5T699 404 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 LBHD1Q9BQE6 289 aaPredicted RBP11.17□□□□□ -0.62
PRDM1-201ENST00000369089 TYW1Q9NV66 732 aaKnown RBP11.17□□□□□ -0.62
PRDM1-201ENST00000369089 HACD3Q9P035 362 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 TRPC5Q9UL62 973 aaPredicted RBP11.17□□□□□ -0.62
PRDM1-201ENST00000369089 TRIM17Q9Y577 477 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 WFS1O76024 890 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 IL15P40933 162 aaPredicted RBP11.17□□□□□ -0.62
PRDM1-201ENST00000369089 UAP1Q16222 522 aaPredicted RBP11.17□□□□□ -0.62
PRDM1-201ENST00000369089 IZUMO2Q6UXV1 221 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 RIBC1Q8N443 379 aaPredicted RBP11.17□□□□□ -0.62
PRDM1-201ENST00000369089 PLEKHF1Q96S99 279 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 ZNF184Q99676 751 aaPredicted RBP11.17□□□□□ -0.62
PRDM1-201ENST00000369089 SPC25Q9HBM1 224 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 DISC1Q9NRI5 854 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 FAM207AQ9NSI2 230 aaPredicted RBP11.17□□□□□ -0.62
PRDM1-201ENST00000369089 PCDHA13Q9Y5I0 950 aa11.17□□□□□ -0.62
PRDM1-201ENST00000369089 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 ZNF185O15231 689 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 KRT6AP02538 564 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 KRT6BP04259 564 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 MXI1P50539 228 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 SGSM1Q2NKQ1 1148 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 RABGAP1LQ5R372 815 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 RARS2Q5T160 578 aaKnown RBP11.16□□□□□ -0.62
PRDM1-201ENST00000369089 TRAF7Q6Q0C0 670 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 HELBQ8NG08 1087 aaPredicted RBP11.16□□□□□ -0.62
PRDM1-201ENST00000369089 RXFP1Q9HBX9 757 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 SLC5A4Q9NY91 659 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 STMN3Q9NZ72 180 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 SEC63Q9UGP8 760 aaKnown RBP11.16□□□□□ -0.62
PRDM1-201ENST00000369089 ARPC4-TTLL3A0A0A6YYG9 625 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 F8VZ95 297 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 BAG3O95817 575 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 CARSP49589 748 aaKnown RBP11.16□□□□□ -0.62
PRDM1-201ENST00000369089 C21orf59P57076 290 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 FOXD4Q12950 439 aaPredicted RBP11.16□□□□□ -0.62
PRDM1-201ENST00000369089 DDB1Q16531 1140 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 NFRKBQ6P4R8 1299 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms