RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 TREHO43280 583 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 GNAT1P11488 350 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 CYP2C9P11712 490 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 KLRC1P26715 233 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 TXLNAP40222 546 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 GRB10Q13322 594 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 ZNF484Q5JVG2 852 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 AXDND1Q5T1B0 1012 aaPredicted RBP15.53■□□□□ 0.08
TPM3-211ENST00000368531 SHC4Q6S5L8 630 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 OTUD6AQ7L8S5 288 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 SESTD1Q86VW0 696 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 C7orf61Q8IZ16 206 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 ZNF579Q8NAF0 562 aaKnown RBP15.53■□□□□ 0.08
TPM3-211ENST00000368531 CEP170P1Q96L14 293 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 NACC1Q96RE7 527 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 NIFKQ9BYG3 293 aaKnown RBP15.53■□□□□ 0.08
TPM3-211ENST00000368531 CCSER1Q9C0I3 900 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 BMP2KQ9NSY1 1161 aaPredicted RBP15.53■□□□□ 0.08
TPM3-211ENST00000368531 KDM3AQ9Y4C1 1321 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 ZBTB42B2RXF5 422 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 E9PMD0 336 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 LYPLA2O95372 231 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 MARCH8Q5T0T0 291 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 C1orf53Q5VUE5 145 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 ANKRD33Q7Z3H0 272 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 KCNK18Q7Z418 384 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 PDILTQ8N807 584 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 SEZ6LQ9BYH1 1024 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 PRDM5Q9NQX1 630 aaPredicted RBP15.52■□□□□ 0.08
TPM3-211ENST00000368531 CYP26B1Q9NR63 512 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 PCDH10Q9P2E7 1040 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 CCDC39Q9UFE4 941 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 TUBE1Q9UJT0 475 aa15.52■□□□□ 0.08
TPM3-211ENST00000368531 COL1A2P08123 1366 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 LOXHD1Q8IVV2 1947 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 EVI5O60447 810 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 CD4P01730 458 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 SSBP05455 408 aaKnown RBP eCLIP15.51■□□□□ 0.07
TPM3-211ENST00000368531 PLCG1P19174 1290 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 TBC1D8BQ0IIM8 1120 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 FAAP100Q0VG06 881 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 DHX8Q14562 1220 aaKnown RBP15.51■□□□□ 0.07
TPM3-211ENST00000368531 MTHFD1LQ6UB35 978 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 RUFY4Q6ZNE9 571 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 METTL13Q8N6R0 699 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 NT5C3AQ9H0P0 336 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 FAM49AQ9H0Q0 323 aaPredicted RBP15.51■□□□□ 0.07
TPM3-211ENST00000368531 SUGCTQ9HAC7 445 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 ANKEF1Q9NU02 776 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 TMEM39AQ9NV64 488 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 DNM3Q9UQ16 869 aa15.51■□□□□ 0.07
TPM3-211ENST00000368531 BRCA2P51587 3418 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 ARHGEF35A5YM69 484 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 GOLGA6L4A6NEF3 574 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 CLTBP09497 229 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 MUTP22033 750 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 RARRES1P49788 294 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 ADAM17P78536 824 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 TARBP2Q15633 366 aaKnown RBP15.5■□□□□ 0.07
TPM3-211ENST00000368531 TMEM119Q4V9L6 283 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 HYIQ5T013 277 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 RRAGBQ5VZM2 374 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 ADALQ6DHV7 355 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 EFCAB12Q6NXP0 572 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 MAEAQ7L5Y9 396 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 SH3RF1Q7Z6J0 888 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 LRRC71Q8N4P6 559 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 WNT8BQ93098 351 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 TOX2Q96NM4 488 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 CTAGE1Q96RT6 745 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 PPP1R12CQ9BZL4 782 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 BHMT2Q9H2M3 363 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 FAM13BQ9NYF5 915 aa15.5■□□□□ 0.07
TPM3-211ENST00000368531 A0A087X0B3 334 aa15.49■□□□□ 0.07
TPM3-211ENST00000368531 A0A1B0GVL5 298 aa15.49■□□□□ 0.07
TPM3-211ENST00000368531 USO1O60763 962 aaKnown RBP15.49■□□□□ 0.07
TPM3-211ENST00000368531 C22orf31O95567 290 aa15.49■□□□□ 0.07
TPM3-211ENST00000368531 EYA4O95677 639 aa15.49■□□□□ 0.07
TPM3-211ENST00000368531 XRCC6P12956 609 aaKnown RBP eCLIP15.49■□□□□ 0.079e-13■□□□□ 8.6
TPM3-211ENST00000368531 HOXC8P31273 242 aa15.49■□□□□ 0.07
TPM3-211ENST00000368531 CLCN3P51790 818 aa15.49■□□□□ 0.07
TPM3-211ENST00000368531 POLGP54098 1239 aaPredicted RBP15.49■□□□□ 0.07
TPM3-211ENST00000368531 RESP18Q5W5W9 173 aa15.49■□□□□ 0.07
TPM3-211ENST00000368531 LRRC15Q8TF66 581 aa15.49■□□□□ 0.07
TPM3-211ENST00000368531 DNAJB3Q8WWF6 145 aa15.49■□□□□ 0.07
TPM3-211ENST00000368531 DBR1Q9UK59 544 aaKnown RBP15.49■□□□□ 0.07
TPM3-211ENST00000368531 MBLAC1A4D2B0 266 aaPredicted RBP15.48■□□□□ 0.07
TPM3-211ENST00000368531 RBAK-RBAKDNI3L0D1 243 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 MAGEB2O15479 319 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 SLC26A4O43511 780 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 PLA2G4BP0C869 781 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 SYN1P17600 705 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 CMA1P23946 247 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 THPOP40225 353 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 STAT6P42226 847 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 TMEM62Q0P6H9 643 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 PTK7Q13308 1070 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 MCM6Q14566 821 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 CSPP1Q1MSJ5 1256 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 PADI6Q6TGC4 694 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms