RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 YWHAHQ04917 246 aaPredicted RBP11.76□□□□□ -0.53
CLIP1-203ENST00000361654 ZNF827Q17R98 1081 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 MB21D1Q8N884 522 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 SPDL1Q96EA4 605 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 TRIM54Q9BYV2 358 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 BHMT2Q9H2M3 363 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 PTPROQ16827 1216 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 ZNF658Q5TYW1 1059 aaPredicted RBP11.76□□□□□ -0.53
CLIP1-203ENST00000361654 MAP4K1Q92918 833 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 HNRNPCL2B2RXH8 293 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 ZNF197O14709 1029 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 HNRNPCL1O60812 293 aaKnown RBP11.76□□□□□ -0.53
CLIP1-203ENST00000361654 RASSF7Q02833 373 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 PKP1Q13835 747 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
CLIP1-203ENST00000361654 ZNF467Q7Z7K2 595 aaPredicted RBP11.76□□□□□ -0.53
CLIP1-203ENST00000361654 RHPN2Q8IUC4 686 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 FAM20AQ96MK3 541 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 GPR101Q96P66 508 aaPredicted RBP11.76□□□□□ -0.53
CLIP1-203ENST00000361654 MRPL4Q9BYD3 311 aaKnown RBP11.76□□□□□ -0.53
CLIP1-203ENST00000361654 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 GDAQ9Y2T3 454 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 DAAM1Q9Y4D1 1078 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 PTCH1Q13635 1447 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 RASGRF1Q13972 1273 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 MXD4Q14582 209 aaPredicted RBP11.75□□□□□ -0.53
CLIP1-203ENST00000361654 MEI1Q5TIA1 1274 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 PPP4R4Q6NUP7 873 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 AAASQ9NRG9 546 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 KLHL8Q9P2G9 620 aaPredicted RBP11.75□□□□□ -0.53
CLIP1-203ENST00000361654 PTPN22Q9Y2R2 807 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 SUGT1Q9Y2Z0 365 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 SPATA31A6Q5VVP1 1343 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 GOLGA8KD6RF30 607 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 MT-ND3P03897 115 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 LIFRP42702 1097 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 BRD3Q15059 726 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
CLIP1-203ENST00000361654 TSPYL2Q9H2G4 693 aaPredicted RBP11.75□□□□□ -0.53
CLIP1-203ENST00000361654 HACD3Q9P035 362 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 SUN2Q9UH99 717 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 GOLGA8IPA6NC78 632 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 GOLGA8JA6NMD2 632 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 C19orf81C9J6K1 198 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 NAA35Q5VZE5 725 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 ANGPTL8Q6UXH0 198 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 PDIK1LQ8N165 341 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 STAG1Q8WVM7 1258 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
CLIP1-203ENST00000361654 KLC2Q9H0B6 622 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 KDM5CP41229 1560 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 COBLO75128 1261 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 GFPT2O94808 682 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 HUNKP57058 714 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 CDO1Q16878 200 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 TKFCQ3LXA3 575 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 ARL6IP4Q66PJ3 421 aaKnown RBP11.75□□□□□ -0.53
CLIP1-203ENST00000361654 SH3RF3Q8TEJ3 882 aaPredicted RBP11.75□□□□□ -0.53
CLIP1-203ENST00000361654 TEKT4Q8WW24 435 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 PLEKHA4Q9H4M7 779 aa11.75□□□□□ -0.53
CLIP1-203ENST00000361654 METP08581 1390 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 STXBP3O00186 592 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 MMP1P03956 469 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 LRRC63Q05C16 580 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 SFSWAPQ12872 951 aaKnown RBP11.74□□□□□ -0.53
CLIP1-203ENST00000361654 ELF2Q15723 593 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 ANKRD20A4Q4UJ75 823 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 ANKRD20A8PQ5CZ79 823 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 ANKRD20A2Q5SQ80 823 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 HP1BP3Q5SSJ5 553 aaPredicted RBP11.74□□□□□ -0.53
CLIP1-203ENST00000361654 ANKRD20A1Q5TYW2 823 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLIP1-203ENST00000361654 ULK4Q96C45 1275 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 SPON2Q9BUD6 331 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLIP1-203ENST00000361654 SP110Q9HB58 689 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 FANCLQ9NW38 375 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 SH2B2O14492 632 aaPredicted RBP11.74□□□□□ -0.53
CLIP1-203ENST00000361654 SLFN14P0C7P3 912 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 SZRD1Q7Z422 152 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 DEPDC1BQ8WUY9 529 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 PBXIP1Q96AQ6 731 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 MXD3Q9BW11 206 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 CNOT7Q9UIV1 285 aaKnown RBP11.74□□□□□ -0.53
CLIP1-203ENST00000361654 UTYO14607 1347 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 CCDC151A5D8V7 595 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 IPO5O00410 1097 aaKnown RBP11.74□□□□□ -0.53
CLIP1-203ENST00000361654 TFRCP02786 760 aaKnown RBP11.74□□□□□ -0.53
CLIP1-203ENST00000361654 P4HBP07237 508 aaKnown RBP11.74□□□□□ -0.53
CLIP1-203ENST00000361654 CCNE1P24864 410 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 AP3M2P53677 418 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 GTF2H3Q13889 308 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 IER5Q5VY09 327 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 PADI6Q6TGC4 694 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 TTC13Q8NBP0 860 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 CALB1P05937 261 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 CETPP11597 493 aa11.74□□□□□ -0.53
CLIP1-203ENST00000361654 TBXAS1P24557 533 aaPredicted RBP11.74□□□□□ -0.53
CLIP1-203ENST00000361654 DCAF4L1Q3SXM0 396 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms