RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 LCMT1Q9UIC8 334 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 HADHAP40939 763 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 GTSE1Q9NYZ3 720 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 ZNF212Q9UDV6 495 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 BMP3P12645 472 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 NR1H3Q13133 447 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 SZRD1Q7Z422 152 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 THOC1Q96FV9 657 aaKnown RBP15.94■□□□□ 0.14
LMX1B-201ENST00000355497 PAWRQ96IZ0 340 aaKnown RBP15.94■□□□□ 0.14
LMX1B-201ENST00000355497 SMYD3Q9H7B4 428 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 STAP2Q9UGK3 403 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 LEMD3Q9Y2U8 911 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 PI4K2BG5E9Z4 385 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 PRPF3O43395 683 aaKnown RBP15.94■□□□□ 0.14
LMX1B-201ENST00000355497 KCNQ3O43525 872 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 KRT38O76015 456 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 C1orf146Q5VVC0 180 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 CHAMP1Q96JM3 812 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 KANSL2Q9H9L4 492 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 CHCHD3Q9NX63 227 aaKnown RBP15.94■□□□□ 0.14
LMX1B-201ENST00000355497 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 PLXNC1O60486 1568 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 LZICQ8WZA0 190 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 DACH2Q96NX9 599 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 LRRC37BQ96QE4 947 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 USP21Q9UK80 565 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 CLRN2A0PK11 232 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 SH2B2O14492 632 aaPredicted RBP15.93■□□□□ 0.14
LMX1B-201ENST00000355497 DSTYKQ6XUX3 929 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 COA7Q96BR5 231 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 NAF1Q96HR8 494 aaKnown RBP15.93■□□□□ 0.14
LMX1B-201ENST00000355497 RBM41Q96IZ5 413 aaKnown RBP15.93■□□□□ 0.14
LMX1B-201ENST00000355497 NR1H4Q96RI1 486 aaPredicted RBP15.93■□□□□ 0.14
LMX1B-201ENST00000355497 BNIP3LO60238 219 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 DYNLL1P63167 89 aaKnown RBP15.93■□□□□ 0.14
LMX1B-201ENST00000355497 CYP27A1Q02318 531 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 SLFN12LQ6IEE8 588 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 EPM2AIP1Q7L775 607 aaPredicted RBP15.93■□□□□ 0.14
LMX1B-201ENST00000355497 CALR3Q96L12 384 aaKnown RBP15.93■□□□□ 0.14
LMX1B-201ENST00000355497 RMDN2Q96LZ7 410 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 SFMBT1Q9UHJ3 866 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 INSRP06213 1382 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 TMCC1O94876 653 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 GDF11O95390 407 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 COPS2P61201 443 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 E2F4Q16254 413 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 KLHL38Q2WGJ6 581 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 MTBPQ96DY7 904 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 EDEM3Q9BZQ6 932 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 COPRSQ9NQ92 184 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 SYNGAP1Q96PV0 1343 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 GOLGA8IPA6NC78 632 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 GOLGA8JA6NMD2 632 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 RASA4BC9J798 803 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 RASA4O43374 803 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 IMPG1Q17R60 797 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 ALKBH5Q6P6C2 394 aaKnown RBP15.93■□□□□ 0.14
LMX1B-201ENST00000355497 ARHGAP27Q6ZUM4 889 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 GANCQ8TET4 914 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 SPATA17Q96L03 361 aa15.93■□□□□ 0.14
LMX1B-201ENST00000355497 YEATS2Q9ULM3 1422 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 H0Y3Z8 333 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 MFAP3LO75121 409 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 SRGAP2CP0DJJ0 459 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 TRIM60Q495X7 471 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 OR9Q1Q8NGQ5 310 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 TRIM45Q9H8W5 580 aaPredicted RBP15.92■□□□□ 0.14
LMX1B-201ENST00000355497 ABCC10Q5T3U5 1492 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 CYP21A2P08686 494 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 ARHGEF6Q15052 776 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 RCOR1Q9UKL0 485 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 CHGBP05060 677 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 HLA-DPA1P20036 260 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 CAV1Q03135 178 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 PPP1R16BQ96T49 567 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 SUGT1Q9Y2Z0 365 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 SERPINB2P05120 415 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 HSPA2P54652 639 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 KCNA1Q09470 495 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 MTRQ99707 1265 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 A0A087WWV3 80 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 KITP10721 976 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 BAG6P46379 1132 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 HDAC4P56524 1084 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 NR5A1Q13285 461 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 KRT31Q15323 416 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 FSD1LQ9BXM9 530 aa15.92■□□□□ 0.14
LMX1B-201ENST00000355497 KLHL8Q9P2G9 620 aaPredicted RBP15.92■□□□□ 0.14
LMX1B-201ENST00000355497 ATP10BO94823 1461 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 PALMO75781 387 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 SERPINI2O75830 405 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 ADD2P35612 726 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 FBXW4P57775 412 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 MORF4L2Q15014 288 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 UBE2SQ16763 222 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 TTC13Q8NBP0 860 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 IFT43Q96FT9 208 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 PUS3Q9BZE2 481 aaKnown RBP15.91■□□□□ 0.14
LMX1B-201ENST00000355497 MAGEA9P43362 315 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms