RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 COG1Q8WTW3 980 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 MKL1Q969V6 931 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 ESYT3A0FGR9 886 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 SPATA31C1P0DKV0 1188 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 DLATP10515 647 aaKnown RBP10.19□□□□□ -0.78
PRDM9-201ENST00000296682 HDLBPQ00341 1268 aaKnown RBP10.19□□□□□ -0.78
PRDM9-201ENST00000296682 EHBP1Q8NDI1 1231 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 FAM20AQ96MK3 541 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 NOX5Q96PH1 765 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 RPAP3Q9H6T3 665 aaPredicted RBP10.19□□□□□ -0.78
PRDM9-201ENST00000296682 ZNF408Q9H9D4 720 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 FHOD1Q9Y613 1164 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 SLC16A4O15374 487 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 CEP104O60308 925 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 ZBED4O75132 1171 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 AFPP02771 609 aaKnown RBP10.19□□□□□ -0.78
PRDM9-201ENST00000296682 KRT13P13646 458 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 VAV2P52735 878 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 MTMR1Q13613 665 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 TMEM119Q4V9L6 283 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 ANGEL2Q5VTE6 544 aaKnown RBP10.19□□□□□ -0.78
PRDM9-201ENST00000296682 PADI6Q6TGC4 694 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 PRPF38AQ8NAV1 312 aaKnown RBP10.19□□□□□ -0.78
PRDM9-201ENST00000296682 ATG4CQ96DT6 458 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 UNC45AQ9H3U1 944 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 KCNH7Q9NS40 1196 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 SYNPO2Q9UMS6 1093 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 A0A087X0T9 212 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 RASSF10A6NK89 507 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 KCNK3O14649 394 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 SLITRK3O94933 977 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 FAM228BP0C875 321 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 SREBF1P36956 1147 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 SSR1P43307 286 aaKnown RBP10.18□□□□□ -0.78
PRDM9-201ENST00000296682 GCLMP48507 274 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 RPS6P62753 249 aaKnown RBP10.18□□□□□ -0.78
PRDM9-201ENST00000296682 BAATQ14032 418 aaPredicted RBP10.18□□□□□ -0.78
PRDM9-201ENST00000296682 MUM1L1Q5H9M0 696 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 ZNF746Q6NUN9 644 aaPredicted RBP10.18□□□□□ -0.78
PRDM9-201ENST00000296682 RETREG2Q8NC44 543 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 GMCL1Q96IK5 515 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 HACL1Q9UJ83 578 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 ZNF263O14978 683 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 HIP1RO75146 1068 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 PALMO75781 387 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 PRELPP51888 382 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 KCNMA1Q12791 1236 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 MKRN4PQ13434 485 aaPredicted RBP10.18□□□□□ -0.78
PRDM9-201ENST00000296682 HYIQ5T013 277 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 LRRC55Q6ZSA7 311 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 VPS36Q86VN1 386 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 CRYGNQ8WXF5 182 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 RIN2Q8WYP3 895 aaPredicted RBP10.18□□□□□ -0.78
PRDM9-201ENST00000296682 SAAL1Q96ER3 474 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 MBOAT7Q96N66 472 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 NACC1Q96RE7 527 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 RUFY1Q96T51 708 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 DNAJC7Q99615 494 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 KCNMB3Q9NPA1 279 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 MYO1AQ9UBC5 1043 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
PRDM9-201ENST00000296682 GUCY2FP51841 1108 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 SNRNP48Q6IEG0 339 aaKnown RBP10.18□□□□□ -0.78
PRDM9-201ENST00000296682 GBP6Q6ZN66 633 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 RNF207Q6ZRF8 634 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 SEPT14Q6ZU15 432 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 CYFIP1Q7L576 1253 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 TCHPQ9BT92 498 aa10.18□□□□□ -0.78
PRDM9-201ENST00000296682 N4BP1O75113 896 aaKnown RBP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 IBSPP21815 317 aaPredicted RBP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 SLC12A3P55017 1021 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 MKRN3Q13064 507 aaKnown RBP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 SND1Q7KZF4 910 aaKnown RBP eCLIP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 OTOP1Q7RTM1 612 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 NLRX1Q86UT6 975 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 PPM1KQ8N3J5 372 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 SYT2Q8N9I0 419 aaPredicted RBP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 ETNPPLQ8TBG4 499 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 ERGIC2Q96RQ1 377 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 TTYH3Q9C0H2 523 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 GBP3Q9H0R5 595 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 PLAGL2Q9UPG8 496 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 PCNTO95613 3336 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 OPLAHO14841 1288 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 SASH3O75995 380 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 KLRC1P26715 233 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 MCCD1P59942 119 aaPredicted RBP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 TRAF1Q13077 416 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 WHAMMP3Q1A5X7 153 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 SPDYE2Q495Y8 402 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 LMBRD2Q68DH5 695 aaPredicted RBP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 PDXDC1Q6P996 788 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 ZC3H3Q8IXZ2 948 aaKnown RBP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 PAPPA2Q9BXP8 1791 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 EIF3CLB5ME19 914 aaKnown RBP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 EYA4O95677 639 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 TTC19Q6DKK2 380 aaPredicted RBP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 STXBP4Q6ZWJ1 553 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 CCDC170Q8IYT3 715 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 GMCL1P1Q8NEA9 526 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms