RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 ARMT1Q9H993 441 aa11.57□□□□□ -0.56
LRTM1-201ENST00000273286 ZFYVE1Q9HBF4 777 aa11.57□□□□□ -0.56
LRTM1-201ENST00000273286 ARPP21Q9UBL0 812 aaPredicted RBP11.57□□□□□ -0.56
LRTM1-201ENST00000273286 STXBP5LQ9Y2K9 1186 aa11.57□□□□□ -0.56
LRTM1-201ENST00000273286 ACTL7BQ9Y614 415 aa11.57□□□□□ -0.56
LRTM1-201ENST00000273286 ADAMTS4O75173 837 aa11.56□□□□□ -0.56
LRTM1-201ENST00000273286 MBD4O95243 580 aa11.56□□□□□ -0.56
LRTM1-201ENST00000273286 MCTP1Q6DN14 999 aa11.56□□□□□ -0.56
LRTM1-201ENST00000273286 C16orf86Q6ZW13 317 aa11.56□□□□□ -0.56
LRTM1-201ENST00000273286 OSBPL1AQ9BXW6 950 aa11.56□□□□□ -0.56
LRTM1-201ENST00000273286 RBCK1Q9BYM8 510 aa11.56□□□□□ -0.56
LRTM1-201ENST00000273286 LRRCC1Q9C099 1032 aa11.56□□□□□ -0.56
LRTM1-201ENST00000273286 BOLA2Q9H3K6 86 aa11.56□□□□□ -0.56
LRTM1-201ENST00000273286 RAD18Q9NS91 495 aa11.56□□□□□ -0.56
LRTM1-201ENST00000273286 AP4E1Q9UPM8 1137 aa11.56□□□□□ -0.56
LRTM1-201ENST00000273286 OAS3Q9Y6K5 1087 aaKnown RBP11.56□□□□□ -0.56
LRTM1-201ENST00000273286 SOWAHDA6NJG2 315 aa11.55□□□□□ -0.56
LRTM1-201ENST00000273286 RAB6AP20340 208 aa11.55□□□□□ -0.56
LRTM1-201ENST00000273286 CDK8P49336 464 aa11.55□□□□□ -0.56
LRTM1-201ENST00000273286 PLS1Q14651 629 aa11.55□□□□□ -0.56
LRTM1-201ENST00000273286 KCTD2Q14681 263 aa11.55□□□□□ -0.56
LRTM1-201ENST00000273286 FAM109BQ6ICB4 259 aaPredicted RBP11.55□□□□□ -0.56
LRTM1-201ENST00000273286 GIMAP6Q6P9H5 292 aa11.55□□□□□ -0.56
LRTM1-201ENST00000273286 SLC44A5Q8NCS7 719 aa11.55□□□□□ -0.56
LRTM1-201ENST00000273286 ZNF287Q9HBT7 754 aa11.55□□□□□ -0.56
LRTM1-201ENST00000273286 DIS3Q9Y2L1 958 aaKnown RBP11.55□□□□□ -0.56
LRTM1-201ENST00000273286 COL6A3P12111 3177 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 RLFQ13129 1914 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 AKR1B1P15121 316 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 LRRFIP1Q32MZ4 808 aaKnown RBP11.54□□□□□ -0.56
LRTM1-201ENST00000273286 DYMQ7RTS9 669 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 SIRT2Q8IXJ6 389 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 SHISA5Q8N114 240 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 EZH1Q92800 747 aaPredicted RBP11.54□□□□□ -0.56
LRTM1-201ENST00000273286 ALKBH8Q96BT7 664 aaKnown RBP11.54□□□□□ -0.56
LRTM1-201ENST00000273286 ATG4CQ96DT6 458 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 GPATCH3Q96I76 525 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 MAML3Q96JK9 1138 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 TBC1D32Q96NH3 1257 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 KRTAP9-2Q9BYQ4 174 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 MTMR10Q9NXD2 777 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 ADAMTS5Q9UNA0 930 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 SLC4A4Q9Y6R1 1079 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
LRTM1-201ENST00000273286 TMEM238LA0A1B0GVL6 79 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 PRKAB2O43741 272 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 CYP2D6P10635 497 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 RTP1P59025 263 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 SNX17Q15036 470 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 SLC39A5Q6ZMH5 540 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 RIOX2Q8IUF8 465 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 SIAH1Q8IUQ4 282 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 SPICE1Q8N0Z3 855 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 MSL3Q8N5Y2 521 aaKnown RBP11.53□□□□□ -0.56
LRTM1-201ENST00000273286 TRPV1Q8NER1 839 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 DYNLL2Q96FJ2 89 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 SYNPO2Q9UMS6 1093 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 MYH7P12883 1935 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 CUL9Q8IWT3 2517 aa11.53□□□□□ -0.56
LRTM1-201ENST00000273286 BAZ2AQ9UIF9 1905 aaKnown RBP11.53□□□□□ -0.56
LRTM1-201ENST00000273286 ZFYP08048 801 aaPredicted RBP11.52□□□□□ -0.56
LRTM1-201ENST00000273286 RARBP10826 455 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 EEF2P13639 858 aaKnown RBP11.52□□□□□ -0.56
LRTM1-201ENST00000273286 GNAT2P19087 354 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 STAT3P40763 770 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 IRAK1P51617 712 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 GRM2Q14416 872 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 TMEM132BQ14DG7 1078 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 SBK1Q52WX2 424 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 GJC2Q5T442 439 aaPredicted RBP11.52□□□□□ -0.56
LRTM1-201ENST00000273286 CTR9Q6PD62 1173 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 RNF180Q86T96 592 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 EPS8L3Q8TE67 593 aaKnown RBP11.52□□□□□ -0.56
LRTM1-201ENST00000273286 MMP19Q99542 508 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 ECHDC1Q9NTX5 307 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 RCAN3Q9UKA8 241 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 PPP1R9AQ9ULJ8 1098 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 ATP11BQ9Y2G3 1177 aa11.52□□□□□ -0.56
LRTM1-201ENST00000273286 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.52□□□□□ -0.57
LRTM1-201ENST00000273286 VWA5AO00534 786 aa11.52□□□□□ -0.57
LRTM1-201ENST00000273286 ADMP35318 185 aa11.52□□□□□ -0.57
LRTM1-201ENST00000273286 AP3B2Q13367 1082 aa11.52□□□□□ -0.57
LRTM1-201ENST00000273286 CPSF6Q16630 551 aaKnown RBP eCLIP11.52□□□□□ -0.57
LRTM1-201ENST00000273286 KIAA1755Q5JYT7 1200 aa11.52□□□□□ -0.57
LRTM1-201ENST00000273286 TINF2Q9BSI4 451 aa11.52□□□□□ -0.57
LRTM1-201ENST00000273286 TEX13BQ9BXU2 312 aa11.52□□□□□ -0.57
LRTM1-201ENST00000273286 XPNPEP3Q9NQH7 507 aa11.52□□□□□ -0.57
LRTM1-201ENST00000273286 NYAP2Q9P242 653 aa11.52□□□□□ -0.57
LRTM1-201ENST00000273286 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
LRTM1-201ENST00000273286 PARP14Q460N5 1801 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 DNAH12Q6ZR08 3092 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 ATP2A1O14983 1001 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 WNT11O96014 354 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 NFICP08651 508 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 AKR1A1P14550 325 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 LRRC41Q15345 812 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 RPS26P11Q5JNZ5 115 aaPredicted RBP11.51□□□□□ -0.57
LRTM1-201ENST00000273286 ZAR1Q86SH2 424 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 KBTBD3Q8NAB2 608 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 PRPF38AQ8NAV1 312 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms