RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 CYFIP1Q7L576 1253 aa8.29□□□□□ -1.08
USPL1-201ENST00000255304 CCDC17Q96LX7 622 aa8.29□□□□□ -1.08
USPL1-201ENST00000255304 WRNIP1Q96S55 665 aa8.29□□□□□ -1.08
USPL1-201ENST00000255304 FAM217BQ9NTX9 383 aaPredicted RBP8.29□□□□□ -1.08
USPL1-201ENST00000255304 HPCAL4Q9UM19 191 aa8.29□□□□□ -1.08
USPL1-201ENST00000255304 CALUO43852 315 aaPredicted RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 MFAP3LO75121 409 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 CCNE1P24864 410 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 CALRP27797 417 aaKnown RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 FKBP3Q00688 224 aaKnown RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 R3HDM1Q15032 1099 aaKnown RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 NTRK3Q16288 839 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 KAZNQ674X7 775 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 TRIM68Q6AZZ1 485 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 HOOK3Q86VS8 718 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 VGLL2Q8N8G2 317 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 NEDD1Q8NHV4 660 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 ZNF384Q8TF68 577 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 HDAC7Q8WUI4 952 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 CEP170P1Q96L14 293 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 PHF20Q9BVI0 1012 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 NHEJ1Q9H9Q4 299 aaPredicted RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 MED4Q9NPJ6 270 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 TRPC6Q9Y210 931 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 CNTNAP5Q8WYK1 1306 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 CDK5RAP2Q96SN8 1893 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 SYNJ2BP-COX16A0A087WUM0 186 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 RBAK-RBAKDNI3L0D1 243 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 POLRMTO00411 1230 aaKnown RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 ACTN4O43707 911 aaKnown RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 NDUFB10O96000 172 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 ATP1A1P05023 1023 aaKnown RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 NMT1P30419 496 aaKnown RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 TRAPPC10P48553 1259 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 ZBTB33Q86T24 672 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 SESTD1Q86VW0 696 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 ZNF354CQ86Y25 554 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 PRMT6Q96LA8 375 aaPredicted RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 IFT74Q96LB3 600 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 KRT12Q99456 494 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 COX16Q9P0S2 106 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 LARSQ9P2J5 1176 aaKnown RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 CNTNAP4Q9C0A0 1308 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 A0A1B0GUA9 196 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 SLC37A4O43826 429 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 TUBB4AP04350 444 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 ACTN1P12814 892 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 CD58P19256 250 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 MYO1EQ12965 1108 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 PTPAQ15257 358 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 SMAD1Q15797 465 aaKnown RBP8.28□□□□□ -1.08
USPL1-201ENST00000255304 BSPRYQ5W0U4 402 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 AP1ARQ63HQ0 302 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 GCNT4Q9P109 453 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 ASIC3Q9UHC3 531 aa8.28□□□□□ -1.08
USPL1-201ENST00000255304 A0A087X0B3 334 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 TCRBV5S4A2TA0A5A2 114 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 DDTLA6NHG4 134 aaPredicted RBP8.27□□□□□ -1.09
USPL1-201ENST00000255304 LRRC53A6NM62 1247 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 CHUKO15111 745 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 KIF1CO43896 1103 aaKnown RBP8.27□□□□□ -1.09
USPL1-201ENST00000255304 SRGAP2CP0DJJ0 459 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 GCLMP48507 274 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 ATP2C1P98194 919 aaPredicted RBP8.27□□□□□ -1.09
USPL1-201ENST00000255304 STRN3Q13033 797 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 MTM1Q13496 603 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 GRM4Q14833 912 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 TRIP13Q15645 432 aaPredicted RBP8.27□□□□□ -1.09
USPL1-201ENST00000255304 SCARA5Q6ZMJ2 495 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 FAM186BQ8IYM0 893 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 CYP2W1Q8TAV3 490 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 PARD3BQ8TEW8 1205 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 SAAL1Q96ER3 474 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 DYDC2Q96IM9 177 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 MRPL11Q9Y3B7 192 aaKnown RBP8.27□□□□□ -1.09
USPL1-201ENST00000255304 TTLL3Q9Y4R7 772 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 COL4A3BPQ9Y5P4 624 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 GON4LQ3T8J9 2241 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 LAMA4Q16363 1823 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 QSER1Q2KHR3 1735 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 PLEKP08567 350 aaPredicted RBP8.27□□□□□ -1.09
USPL1-201ENST00000255304 PCP11498 1178 aaKnown RBP8.27□□□□□ -1.09
USPL1-201ENST00000255304 HMGCS2P54868 508 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 HDLBPQ00341 1268 aaKnown RBP8.27□□□□□ -1.09
USPL1-201ENST00000255304 IFRD2Q12894 506 aaPredicted RBP8.27□□□□□ -1.09
USPL1-201ENST00000255304 TRIM14Q14142 442 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 WDR44Q5JSH3 913 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 CIAPIN1Q6FI81 312 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 CCDC105Q8IYK2 499 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 MB21D1Q8N884 522 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 TEKT3Q9BXF9 490 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 USP20Q9Y2K6 914 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 CSADQ9Y600 493 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 KNL1Q8NG31 2342 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 A0A1W2PRG0 241 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 INO80B-WBP1J3KQ70 363 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 KIF11P52732 1056 aa8.27□□□□□ -1.09
USPL1-201ENST00000255304 POLGP54098 1239 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms